ncRNA ID | novel_gma_miR8600 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:57500681-57500860 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294476 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAAGAAUCUGUAUACUAAUUGCCU - 24 |
Stem-loop(if miRNA) |
--                    C    ---   CAUCAAAUUACAAGAAAAAUAUCAACAAAUUGAUGUACAUAUAUAUAUAUAAAGAAAG   GCAAUUAGUAUACAGAUUCU GUAC   GUA                                                          C   |||||||||||||||||||| ||||   |||                                                          A   CGUUAAUCAUAUGUCUAAGA CAUG   AUA                                                          C UC                    A    AGA   UAUAUAUACAUGUAGUUUAAUGUUCUUUUUAUAGUUGUUUAAGGCUAUGUUAUAAGUU |
Stem-loop sequence | GCAAUUAGUAUACAGAUUCUCGUACGUACAUCAAAUUACAAGAAAAAUAUCAACAAAUUGAUGUACAUAUAUAUAUAUAAAGAAAGCACUUGAAUAUUGUAUCGGAAUUUGUUGAUAUUUUUCUUGUAAUUUGAUGUACAUAUAUAUAUAAGAGUACAAGAAUCUGUAUACUAAUUGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768345.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102661928 (LOC102661928), transcript variant X2, mRNA | uncharacterized LOC102661928(LOC102661928) | coding protein | psRNATarget | |||||||||
XM_014768346.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102661928 (LOC102661928), transcript variant X3, mRNA | uncharacterized LOC102661928(LOC102661928) | coding protein | psRNATarget |