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BaseInfo

ncRNA ID novel_gma_miR8590
Species Glycine max
Class miRNA
Genome position Chr18:8373656-8373747 [+]
Reference genome Glycine_max_v2.0
Source SRR1294476
Length 24
Mature sequence(if miRNA) 1 - GUCACGUGUCAUGUUCUGAUUGGU - 24
Stem-loop(if miRNA) --                      ---      GAAAACAACA   C
  GUCACGUGUCAUGUUCUGAUUG   GUCAAU          AUG A
  ||||||||||||||||||||||   ||||||          ||| U
  CAGUGUACAGUACAAGACUAAC   CAGUUG          UAC U
CA                      UUA      AGGUAAUUUC   U
Stem-loop sequence GUCACGUGUCAUGUUCUGAUUGGUCAAUGAAAACAACAAUGCAUUUCAUCUUUAAUGGAGUUGACAUUCAAUCAGAACAUGACAUGUGACAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK245140.1
ncRNA:24   UGGUUAGUCUUGUACUGUGCACUG   1
  *|=|||||||||||||||||||||
targets:1577   UCUAAUCAGAACAUGACACGUGAC   1600

0.0 Glycine max cDNA, clone: GMFL01-21-P01 NA coding protein psRNATarget
XM_006602607.2
ncRNA:24   UGGUUAGUCUUGUACUGUGCACUG   1
  |||||||||||||||||||*||||
targets:635   ACCAAUCAGAACAUGACACAUGAC   658

1.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget