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BaseInfo

ncRNA ID	novel_gma_miR8589
Species	Glycine max
Class	miRNA
Genome position	Chr15:40403828-40404023 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	24
Mature sequence(if miRNA)	173 - AUUAUUAUUAUGUUGGCUCUAGCU - 196
Stem-loop(if miRNA)	--             UG         A  AG  AU          G    GA AG    -U    GCUAAAACGAAAAUGG          UAUU  AA   ACA   AUUAUUAUUAUGU  GCUCUAGCU AA  CC  UUUUUAUGUU UGAU  U  GAGU  GCAU                UUUUCUUUGA    AC  CCU   C   |||||||||||||  ||||||||| ||  ||  |||||||||| ||||  |  ||||  ||||                ||||||||||    ||  |||   A   UAAUAAUAAUACA  UGAGAUUGA UU  GG  AAAAAUAUAA AUUA  G  CUCA  UGUA                AAAAGAAACU    UG  GGA   C AA             UA         C  CU  GU          G    AG CU    CU    ----------ACUCUA          ----  AA   CCA
Stem-loop sequence	AUUAUUAUUAUGUUGGCUCUAGCUAAAAGCCAUUUUUUAUGUUGUGAUGAUAGGAGUUGCAUGCUAAAACGAAAAUGGUUUUCUUUGAUAUUACAACCUACACACACCAGGAAGUUCAAAGAAAAAUCUCAAUGUUCACUCUCGGAAUUAGAAUAUAAAAAUGGGUCUUCAGUUAGAGUAUACAUAAUAAUAAUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006594603.2	ncRNA:24   UCGAUCUCGGUUGUAUUAUUAUUA   1   |*||=|=||||||||||*|||||| targets:1478   AACUGGGGCCAACAUAAGAAUAAU   1501 Target Full Sequence	2.5	PREDICTED: Glycine max KH domain-containing protein At4g18375-like (LOC100816819), transcript variant X2, mRNA	KH domain-containing protein At4g18375-like(LOC100816819)	coding protein	psRNATarget
XM_006594602.2	ncRNA:24   UCGAUCUCGGUUGUAUUAUUAUUA   1   |*||=|=||||||||||*|||||| targets:1478   AACUGGGGCCAACAUAAGAAUAAU   1501 Target Full Sequence	2.5	PREDICTED: Glycine max KH domain-containing protein At4g18375-like (LOC100816819), transcript variant X1, mRNA	KH domain-containing protein At4g18375-like(LOC100816819)	coding protein	psRNATarget
XM_003536815.3	ncRNA:24   UCGA--UCUCGGUUGUAUUAUUAUUA   1   |*||--||||||||*||||||||||* targets:738   AACUCCAGAGCCAAAAUAAUAAUAAC   763 Target Full Sequence	2.5	PREDICTED: Glycine max gibberellin 2-beta-dioxygenase 2-like (LOC100779525), mRNA	gibberellin 2-beta-dioxygenase 2-like(LOC100779525)	coding protein	psRNATarget
AK287299.1	ncRNA:24   UCGAUCUCGGUUGUAUUAUUAUUA   1   |||*|*||=||||||||||||||* targets:1041   AGCAAAAGUCAACAUAAUAAUAAG   1064 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-49-B21	NA	coding protein	psRNATarget