ncRNA ID | novel_gma_miR8588 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:41834918-41834965 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 20 |
Mature sequence(if miRNA) | 29 - AACCGAUGUAGAAUUAAGCC - 48 |
Stem-loop(if miRNA) |
--              UAA C  U   AACCGAUGUAGAAU   G CA U   ||||||||||||||   | ||   UUGGCUACAUCUUA   C GU A UU              CUA A  U |
Stem-loop sequence | AACCGAUGUAGAAUUAAGCCAUUAUUGACAUCAUUCUACAUCGGUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006588741.2 |
|
3.0 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA | phosphoinositide phosphatase SAC1-like(LOC102670366) | coding protein | psRNATarget | |||||||||
XM_014763017.1 |
|
3.0 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA | phosphoinositide phosphatase SAC1-like(LOC102660101) | coding protein | psRNATarget |