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BaseInfo

ncRNA ID novel_gma_miR8588
Species Glycine max
Class miRNA
Genome position Chr15:41834918-41834965 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 20
Mature sequence(if miRNA) 29 - AACCGAUGUAGAAUUAAGCC - 48
Stem-loop(if miRNA) --              UAA C  U
  AACCGAUGUAGAAU   G CA U
  ||||||||||||||   | ||
  UUGGCUACAUCUUA   C GU A
UU              CUA A  U
Stem-loop sequence AACCGAUGUAGAAUUAAGCCAUUAUUGACAUCAUUCUACAUCGGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006588741.2
ncRNA:20   CCGAAUUAAGAUGUAGCCAA   1
  *|=*|*||||||||||||||
targets:2828   UGUCUCAUUCUACAUCGGUU   2847

3.0 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA phosphoinositide phosphatase SAC1-like(LOC102670366) coding protein psRNATarget
XM_014763017.1
ncRNA:20   CCGAAUUAAGAUGUAGCCAA   1
  *|=*|*||||||||||||||
targets:2924   UGUCUCAUUCUACAUCGGUU   2943

3.0 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA phosphoinositide phosphatase SAC1-like(LOC102660101) coding protein psRNATarget