ncRNA ID | novel_gma_miR8578 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:48846557-48846636 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 57 - AAUGUCAACUAGAUUUUCUUAGCC - 80 |
Stem-loop(if miRNA) |
--             UUU      C   CA   AU        AAUGUCAACUAGA   UCUUAG CGA  UCG  UAGGAU   |||||||||||||   |||||| |||  |||  |||||U   UUACAGUUGGUUU   GGGAUC GCU  AGU  AUUUUU GA             UUU      A   AC   -C      |
Stem-loop sequence | AAUGUCAACUAGAUUUUCUUAGCCGACAUCGAUUAGGAUUUUUUUACUGACAUCGACUAGGGUUUUUUGGUUGACAUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006584076.2 |
|
2.5 | PREDICTED: Glycine max type I inositol polyphosphate 5-phosphatase 12-like (LOC100817047), transcript variant X2, mRNA | type I inositol polyphosphate 5-phosphatase 12-like(LOC100817047) | coding protein | psRNATarget | |||||||||
XM_006584075.2 |
|
2.5 | PREDICTED: Glycine max type I inositol polyphosphate 5-phosphatase 12-like (LOC100817047), transcript variant X1, mRNA | type I inositol polyphosphate 5-phosphatase 12-like(LOC100817047) | coding protein | psRNATarget |