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BaseInfo

ncRNA ID novel_gma_miR8575
Species Glycine max
Class miRNA
Genome position Chr15:40819153-40819276 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - GUUACUUGGAUUGUUGUAGGCACU - 24
Stem-loop(if miRNA) --        GA UG       CACUUAUAAUC      U  CUAUA   AAU AUGUCUUCUCAAAUU
  GUUACUUG  U  UUGUAGG           GAGGGA GC     UGA   G               C
  ||||||||  |  |||||||           |||||| ||     |||   |
  CAAUGGAU  A  AACAUCU           UUCCCU UG     AAG   G               U
AC        AC GU       -----------      C  --UUG   -UC AAUCCUAAAAGGAUU
Stem-loop sequence GUUACUUGGAUUGUUGUAGGCACUUAUAAUCGAGGGAUGCCUAUAUGAAAUGAUGUCUUCUCAAAUUCUUUAGGAAAAUCCUAAGCUGAAGUUGUCUCCCUUUCUACAAUGACAUAGGUAACCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001248557.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:58   AGUGCCUACAACAACCCAAGUAAC   81

1.5 Glycine max uncharacterized LOC100526884 (LOC100526884), mRNA uncharacterized LOC100526884(LOC100526884) coding protein psRNATarget
BT091686.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:58   AGUGCCUACAACAACCCAAGUAAC   81

1.5 Soybean clone JCVI-FLGm-8H5 unknown mRNA NA coding protein psRNATarget
XM_014766839.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1   AGUGCCUACAACAACCCAAGUAAC   24

1.5 PREDICTED: Glycine max uncharacterized LOC106795906 (LOC106795906), mRNA uncharacterized LOC106795906(LOC106795906) coding protein psRNATarget
XM_014765024.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1   AGUGCCUACAACAACCCAAGUAAC   24

1.5 PREDICTED: Glycine max uncharacterized LOC106795431 (LOC106795431), mRNA uncharacterized LOC106795431(LOC106795431) coding protein psRNATarget
XM_014767510.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:721   AGUGCCUACAACAACCCAAGUAAC   744

1.5 PREDICTED: Glycine max uncharacterized LOC106796064 (LOC106796064), transcript variant X1, mRNA uncharacterized LOC106796064(LOC106796064) coding protein psRNATarget
XM_014779286.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:184   AGUGCCUACAACAACCCAAGUAAC   207

1.5 PREDICTED: Glycine max uncharacterized LOC106799791 (LOC106799791), mRNA uncharacterized LOC106799791(LOC106799791) coding protein psRNATarget
XM_014767511.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:833   AGUGCCUACAACAACCCAAGUAAC   856

1.5 PREDICTED: Glycine max uncharacterized LOC106796064 (LOC106796064), transcript variant X2, mRNA uncharacterized LOC106796064(LOC106796064) coding protein psRNATarget
XM_014772523.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1360   AGUGCCUACAACAACCCAAGUAAC   1383

1.5 PREDICTED: Glycine max uncharacterized LOC106797685 (LOC106797685), mRNA uncharacterized LOC106797685(LOC106797685) coding protein psRNATarget
XM_014766618.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1129   AGUGCCUACAACAACCCAAGUAAC   1152

1.5 PREDICTED: Glycine max uncharacterized LOC106795740 (LOC106795740), transcript variant X2, mRNA uncharacterized LOC106795740(LOC106795740) coding protein psRNATarget
XM_014766617.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1128   AGUGCCUACAACAACCCAAGUAAC   1151

1.5 PREDICTED: Glycine max uncharacterized LOC106795740 (LOC106795740), transcript variant X1, mRNA uncharacterized LOC106795740(LOC106795740) coding protein psRNATarget
XM_014774049.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1182   AGUGCCUACAACAACCCAAGUAAC   1205

1.5 PREDICTED: Glycine max uncharacterized LOC106798121 (LOC106798121), mRNA uncharacterized LOC106798121(LOC106798121) coding protein psRNATarget
XM_014768201.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1800   AGUGCCUACAACAACCCAAGUAAC   1823

1.5 PREDICTED: Glycine max uncharacterized LOC106796321 (LOC106796321), transcript variant X2, mRNA uncharacterized LOC106796321(LOC106796321) coding protein psRNATarget
XM_014768198.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1800   AGUGCCUACAACAACCCAAGUAAC   1823

1.5 PREDICTED: Glycine max uncharacterized LOC106796321 (LOC106796321), transcript variant X1, mRNA uncharacterized LOC106796321(LOC106796321) coding protein psRNATarget
XM_014776520.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1848   AGUGCCUACAACAACCCAAGUAAC   1871

1.5 PREDICTED: Glycine max uncharacterized LOC106798933 (LOC106798933), mRNA uncharacterized LOC106798933(LOC106798933) coding protein psRNATarget
XM_014762198.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1842   AGUGCCUACAACAACCCAAGUAAC   1865

1.5 PREDICTED: Glycine max uncharacterized LOC106794611 (LOC106794611), mRNA uncharacterized LOC106794611(LOC106794611) coding protein psRNATarget
XM_014774577.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:1921   AGUGCCUACAACAACCCAAGUAAC   1944

1.5 PREDICTED: Glycine max uncharacterized LOC106798386 (LOC106798386), mRNA uncharacterized LOC106798386(LOC106798386) coding protein psRNATarget
XM_014764168.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:2181   AGUGCCUACAACAACCCAAGUAAC   2204

1.5 PREDICTED: Glycine max uncharacterized LOC106795202 (LOC106795202), mRNA uncharacterized LOC106795202(LOC106795202) coding protein psRNATarget
XM_014776847.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:2198   AGUGCCUACAACAACCCAAGUAAC   2221

1.5 PREDICTED: Glycine max uncharacterized LOC106798992 (LOC106798992), transcript variant X3, mRNA uncharacterized LOC106798992(LOC106798992) coding protein psRNATarget
XM_014767141.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:2447   AGUGCCUACAACAACCCAAGUAAC   2470

1.5 PREDICTED: Glycine max uncharacterized LOC106796009 (LOC106796009), mRNA uncharacterized LOC106796009(LOC106796009) coding protein psRNATarget
XM_014764207.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:2523   AGUGCCUACAACAACCCAAGUAAC   2546

1.5 PREDICTED: Glycine max uncharacterized LOC106795206 (LOC106795206), mRNA uncharacterized LOC106795206(LOC106795206) coding protein psRNATarget
XM_014762313.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:3158   AGUGCCUACAACAACCCAAGUAAC   3181

1.5 PREDICTED: Glycine max uncharacterized LOC106794650 (LOC106794650), mRNA uncharacterized LOC106794650(LOC106794650) coding protein psRNATarget
XM_014771454.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||||||*|||||||||
targets:3159   AGUGCCUACAACAACCCAAGUAAC   3182

1.5 PREDICTED: Glycine max uncharacterized LOC106797229 (LOC106797229), mRNA uncharacterized LOC106797229(LOC106797229) coding protein psRNATarget
XM_014779296.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  |||*||||||||||*|||||||||
targets:1776   AGUUCCUACAACAACCCAAGUAAC   1799

1.5 PREDICTED: Glycine max uncharacterized LOC106799792 (LOC106799792), mRNA uncharacterized LOC106799792(LOC106799792) coding protein psRNATarget
XM_014762093.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  |||*||||||||||*|||||||||
targets:1872   AGUUCCUACAACAACCCAAGUAAC   1895

1.5 PREDICTED: Glycine max uncharacterized LOC106794574 (LOC106794574), mRNA uncharacterized LOC106794574(LOC106794574) coding protein psRNATarget
XM_014771488.1
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  ||||||||||=|||*|||||||||
targets:1   AGUGCCUACAGCAACCCAAGUAAC   24

2.5 PREDICTED: Glycine max uncharacterized LOC106797241 (LOC106797241), mRNA uncharacterized LOC106797241(LOC106797241) coding protein psRNATarget
XM_006573938.2
ncRNA:24   UCACGGAUGUUGUUAGGUUCAUUG   1
  |*||||||=|||||*|||||||||
targets:1809   AAUGCCUAUAACAACCCAAGUAAC   1832

2.5 PREDICTED: Glycine max uncharacterized LOC102667573 (LOC102667573), mRNA uncharacterized LOC102667573(LOC102667573) coding protein psRNATarget
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