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BaseInfo

ncRNA ID novel_gma_miR8574
Species Glycine max
Class miRNA
Genome position Chr15:40769373-40769435 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 22
Mature sequence(if miRNA) 1 - UCAUAACCGAUGUAGAAAGACC - 22
Stem-loop(if miRNA) --     A CG   U      A  A    AAC
  UCAUA C  AUG AGAAAG CC UCAG   C
  ||||| |  ||| |||||| || ||||
  AGUAU G  UAU UUUUUC GG AGUU   G
CU     - AU   U      C  A    GUA
Stem-loop sequence UCAUAACCGAUGUAGAAAGACCAUCAGAACCGAUGUUGAAGGCCUUUUUUUAUUAGUAUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:22   CCAGAAAGAUGUAGCCAAUACU   1
  *|||||||||||||||||||*|
targets:1863   UGUCUUUCUACAUCGGUUAUCA   1884

1.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_003539359.3
ncRNA:22   CCAGAAAGAUGUAGCCAAUACU   1
  |*||*||||||||||||||*||
targets:2708   GAUCCUUCUACAUCGGUUACGA   2729

2.5 PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA MLO-like protein 6(LOC100776714) coding protein psRNATarget