ncRNA ID | novel_gma_miR8574 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:40769373-40769435 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCAUAACCGAUGUAGAAAGACC - 22 |
Stem-loop(if miRNA) |
--     A CG   U      A  A    AAC   UCAUA C  AUG AGAAAG CC UCAG   C   ||||| |  ||| |||||| || ||||   AGUAU G  UAU UUUUUC GG AGUU   G CU     - AU   U      C  A    GUA |
Stem-loop sequence | UCAUAACCGAUGUAGAAAGACCAUCAGAACCGAUGUUGAAGGCCUUUUUUUAUUAGUAUGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767461.1 |
|
1.5 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget | |||||||||
XM_003539359.3 |
|
2.5 | PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA | MLO-like protein 6(LOC100776714) | coding protein | psRNATarget |