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BaseInfo

ncRNA ID novel_gma_miR8571
Species Glycine max
Class miRNA
Genome position Chr15:37871018-37871088 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 1 - AACAAGAAAUAAGGAAGGAUG - 21
Stem-loop(if miRNA) --           A               A   UUG
  AACAAGAAAUA GGAAGGAUGCAGUCU GGA   U
  ||||||||||| ||||||||||||||| |||
  UUGUUCUUUAU CCUUCCUACGUCAGA CCU   G
AC           C               -   UAA
Stem-loop sequence AACAAGAAAUAAGGAAGGAUGCAGUCUAGGAUUGUGAAUUCCAGACUGCAUCCUUCCCUAUUUCUUGUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539107.3
ncRNA:21   GUAG-GAAGGAAUAAAGAACAA   1
  **||-|||=|||||||||||||
targets:540   GUUCUCUUUCUUAUUUCUUGUU   561

3.0 PREDICTED: Glycine max tobamovirus multiplication protein 2A-like (LOC100815033), mRNA tobamovirus multiplication protein 2A-like(LOC100815033) coding protein psRNATarget
XM_003517331.3
ncRNA:21   GUAG-GAAGGAAUAAAGAACAA   1
  **||-|||=|||||||||||||
targets:503   GUUCUCUUUCUUAUUUCUUGUU   524

3.0 PREDICTED: Glycine max tobamovirus multiplication protein 2A-like (LOC100791911), mRNA tobamovirus multiplication protein 2A-like(LOC100791911) coding protein psRNATarget
BT098971.1
ncRNA:21   GUAG-GAAGGAAUAAAGAACAA   1
  **||-|||=|||||||||||||
targets:529   GUUCUCUUUCUUAUUUCUUGUU   550

3.0 Soybean clone JCVI-FLGm-16F2 unknown mRNA NA coding protein psRNATarget