ncRNA ID | novel_gma_miR8569 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:49251153-49251301 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUAUGGAUCAACUUGAUCUGU - 21 |
Stem-loop(if miRNA) |
--       C              ---      UUA      C                       A         A   AGAUCAA UUGAUCCAUAUGUU   GAUAUU   AGCAUA GGAUCAACUUGAUUUGUAAAAGA UUAUGGAUC A   ||||||| ||||||||||||||   ||||||   |||||| ||||||||||||||||||||||| ||||||||| C   UCUAGUU AACUAGGUAUACAA   UUAUAG   UUGUAU CUUAGUUGAACUAAACAUUUUCU AAUGCCUAG U UG       C              AUU      ---      A                       G         U |
Stem-loop sequence | AGAUCAACUUGAUCCAUAUGUUGAUAUUUUAAGCAUACGGAUCAACUUGAUUUGUAAAAGAAUUAUGGAUCAACUUGAUCCGUAAGUCUUUUACAAAUCAAGUUGAUUCAUAUGUUGAUAUUUUAAACAUAUGGAUCAACUUGAUCUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006600975.2 |
|
1.0 | PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA | basic leucine zipper 9-like(LOC100776831) | coding protein | psRNATarget | |||||||||
BT095352.1 |
|
3.0 | Soybean clone JCVI-FLGm-7O17 unknown mRNA | NA | coding protein | psRNATarget |