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BaseInfo

ncRNA ID novel_gma_miR8569
Species Glycine max
Class miRNA
Genome position Chr1:49251153-49251301 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 1 - AUAUGGAUCAACUUGAUCUGU - 21
Stem-loop(if miRNA) --       C              ---      UUA      C                       A         A
  AGAUCAA UUGAUCCAUAUGUU   GAUAUU   AGCAUA GGAUCAACUUGAUUUGUAAAAGA UUAUGGAUC A
  ||||||| ||||||||||||||   ||||||   |||||| ||||||||||||||||||||||| ||||||||| C
  UCUAGUU AACUAGGUAUACAA   UUAUAG   UUGUAU CUUAGUUGAACUAAACAUUUUCU AAUGCCUAG U
UG       C              AUU      ---      A                       G         U
Stem-loop sequence AGAUCAACUUGAUCCAUAUGUUGAUAUUUUAAGCAUACGGAUCAACUUGAUUUGUAAAAGAAUUAUGGAUCAACUUGAUCCGUAAGUCUUUUACAAAUCAAGUUGAUUCAUAUGUUGAUAUUUUAAACAUAUGGAUCAACUUGAUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600975.2
ncRNA:21   UGUCUAGUUCAACUAGGUAUA   1
  ||=||||||||||||||||||
targets:1189   ACGGAUCAAGUUGAUCCAUAU   1209

1.0 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget
BT095352.1
ncRNA:21   UGUCUAGUUCAACUAGGUAUA   1
  |||*||*|||||||||||||*
targets:992   ACACAUAAAGUUGAUCCAUAC   1012

3.0 Soybean clone JCVI-FLGm-7O17 unknown mRNA NA coding protein psRNATarget