Search result

BaseInfo

ncRNA ID novel_gma_miR8559
Species Glycine max
Class miRNA
Genome position Chr15:18534457-18534529 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - UUAACAUCGAUUUUCCAAAAACCG - 24
Stem-loop(if miRNA) --              CC                UA
  UUAACAUCGAUUUU  AAAAACCGAUGUUAAC  C
  ||||||||||||||  ||||||||||||||||  U
  AAUUGUAGCUAAAA  UUUUUGGCUACAAUUG  C
GU              AA                UA
Stem-loop sequence UUAACAUCGAUUUUCCAAAAACCGAUGUUAACUACUCAUGUUAACAUCGGUUUUUAAAAAAUCGAUGUUAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774748.1
ncRNA:24   GCCAAAAACCUUUUAGCUACAAUU   1
  ||*|||||||=|||||||||||||
targets:136   CGAUUUUUGGGAAAUCGAUGUUAA   159

1.0 PREDICTED: Glycine max LON peptidase N-terminal domain and RING finger protein 1-like (LOC100797798), transcript variant X8, mRNA LON peptidase N-terminal domain and RING finger protein 1-like(LOC100797798) coding protein psRNATarget
XM_014774747.1
ncRNA:24   GCCAAAAACCUUUUAGCUACAAUU   1
  ||*|||||||=|||||||||||||
targets:134   CGAUUUUUGGGAAAUCGAUGUUAA   157

1.0 PREDICTED: Glycine max LON peptidase N-terminal domain and RING finger protein 1-like (LOC100797798), transcript variant X7, mRNA LON peptidase N-terminal domain and RING finger protein 1-like(LOC100797798) coding protein psRNATarget