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BaseInfo

ncRNA ID	novel_gma_miR8555
Species	Glycine max
Class	miRNA
Genome position	Chr14:12418932-12419138 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	21
Mature sequence(if miRNA)	1 - CAUUUAUUAGAGGUUGCACUA - 21
Stem-loop(if miRNA)	--                        GA                    G                           A      -      C         C      CAUUUAUUAGAGGUUGCACUAGAA  AUCAACAUCAAUCUGUGCUU UUCCUCAUCUACCAGCUCAAUAUCUUU UUUUCA CUUUUG UUUUGUAAA UACA   ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||U   GUAAAUAAUUUCCAACGUGAUCUU  UAGUUGUGGUUAGACACGAA AAGGAGUAGAUGGUCGAGUUAUAGAAA GAAAGU GAAAAC AAAACAUUU AUGU GU                        GC                    G                           G      U      -         A
Stem-loop sequence	CAUUUAUUAGAGGUUGCACUAGAAGAAUCAACAUCAAUCUGUGCUUGUUCCUCAUCUACCAGCUCAAUAUCUUUAUUUUCACUUUUGCUUUUGUAAACUACAUUGUAAUUUACAAAACAAAAGUUGAAAGGAAAGAUAUUGAGCUGGUAGAUGAGGAAGAAGCACAGAUUGGUGUUGAUCGUUCUAGUGCAACCUUUAAUAAAUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006591670.1	ncRNA:21   AUCACGUUGGAGAUUAUUUAC   1   ||||||||||||||||||||* targets:105   UAGUGCAACCUCUAAUAAAUC   125 Target Full Sequence	1.0	PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA	glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828)	coding protein	psRNATarget
XM_006586135.2	ncRNA:21   AUCACGUUGGAGAUUAUUUAC   1   ||||||||||||||||||||* targets:849   UAGUGCAACCUCUAAUAAAUC   869 Target Full Sequence	1.0	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_014779469.1	ncRNA:21   AUCACGUUGGAGAUUAUUUAC   1   ||||||||||||||||||||* targets:849   UAGUGCAACCUCUAAUAAAUC   869 Target Full Sequence	1.0	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_014764387.1	ncRNA:21   AUCACGUUGGAGAUUAUUUAC   1   ||||||||||||||=|||||* targets:694   UAGUGCAACCUCUAGUAAAUC   714 Target Full Sequence	2.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 4-like (LOC100812737), mRNA	SNF2 domain-containing protein CLASSY 4-like(LOC100812737)	coding protein	psRNATarget