ncRNA ID | novel_gma_miR8552 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:3978148-3978255 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 20 |
Mature sequence(if miRNA) | 89 - AAUUUUAUUUAUGUACGGCU - 108 |
Stem-loop(if miRNA) |
--AA      U        GC    UCUU     CUGCA      CCAU     G  A     UUUUAU UAUGUACG  UAUC    CAUGU     CAUUCG    AAAGU CC U     |||||| ||||||||  ||||    |||||     ||||||    ||||| ||     AAAAUA AUACAUGU  GUAG    GUACG     GUAAGU    UUUCG GG U UGUA      U        --    --CU     --UCA      -AUC     -  U |
Stem-loop sequence | AAUUUUAUUUAUGUACGGCUAUCUCUUCAUGUCUGCACAUUCGCCAUAAAGUGCCAUUUGGGCUUUCUAUGAAUGACUGCAUGUCGAUGUGUACAUAUAUAAAAAUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT098153.1 |
|
3.0 | Soybean clone JCVI-FLGm-22N22 unknown mRNA | NA | coding protein | psRNATarget |