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BaseInfo

ncRNA ID novel_gma_miR8552
Species Glycine max
Class miRNA
Genome position Chr14:3978148-3978255 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 20
Mature sequence(if miRNA) 89 - AAUUUUAUUUAUGUACGGCU - 108
Stem-loop(if miRNA) --AA      U        GC    UCUU     CUGCA      CCAU     G  A
    UUUUAU UAUGUACG  UAUC    CAUGU     CAUUCG    AAAGU CC U
    |||||| ||||||||  ||||    |||||     ||||||    ||||| ||
    AAAAUA AUACAUGU  GUAG    GUACG     GUAAGU    UUUCG GG U
UGUA      U        --    --CU     --UCA      -AUC     -  U
Stem-loop sequence AAUUUUAUUUAUGUACGGCUAUCUCUUCAUGUCUGCACAUUCGCCAUAAAGUGCCAUUUGGGCUUUCUAUGAAUGACUGCAUGUCGAUGUGUACAUAUAUAAAAAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098153.1
ncRNA:20   UCGGCAUGUAUUUAUUUUAA   1
  |**|||*|||||||||||||
targets:190   ACACGUCCAUAAAUAAAAUU   209

3.0 Soybean clone JCVI-FLGm-22N22 unknown mRNA NA coding protein psRNATarget