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BaseInfo

ncRNA ID	novel_gma_miR8544
Species	Glycine max
Class	miRNA
Genome position	Chr14:9524129-9524205 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	23
Mature sequence(if miRNA)	1 - AUUUUGUAGGAUUGAGUUAGGCU - 23
Stem-loop(if miRNA)	--    U       U    --        UAACC     U   AUUU GUAGGAU GAGU  UAGGCUCA     CAUGU A   |||| ||||||| ||||  ||||||||     |||||   UAAA UAUUCUA CUCG  AUCCGAGU     GUACA U UC    U       -    AU        CUAUA     A
Stem-loop sequence	AUUUUGUAGGAUUGAGUUAGGCUCAUAACCCAUGUUAUAACAUGAUAUCUGAGCCUAUAGCUCAUCUUAUUAAAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006591104.2	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   ||=|||||||||||||||||||| targets:3366   AGUCUAACUCAAUCCUACAAAAU   3388 Target Full Sequence	0.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC100796191), mRNA	TMV resistance protein N-like(LOC100796191)	coding protein	psRNATarget
XM_006590969.2	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   =||=||||||||||||||||||* targets:2524   GGCUUAACUCAAUCCUACAAAAC   2546 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100797428 (LOC100797428), transcript variant X3, mRNA	uncharacterized LOC100797428(LOC100797428)	coding protein	psRNATarget
XM_014775065.1	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   =|==||||||||*|||||||||| targets:1670   GGUUUAACUCAACCCUACAAAAU   1692 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X4, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775059.1	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   =|==||||||||*|||||||||| targets:1523   GGUUUAACUCAACCCUACAAAAU   1545 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X1, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775066.1	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   =|==||||||||*|||||||||| targets:1667   GGUUUAACUCAACCCUACAAAAU   1689 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X5, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775062.1	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   =|==||||||||*|||||||||| targets:1668   GGUUUAACUCAACCCUACAAAAU   1690 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X3, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775060.1	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   =|==||||||||*|||||||||| targets:1668   GGUUUAACUCAACCCUACAAAAU   1690 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X2, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_006595692.2	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   **|=||||||*|||||||||||| targets:1212   UACUUAACUCCAUCCUACAAAAU   1234 Target Full Sequence	1.5	PREDICTED: Glycine max AT-hook motif nuclear-localized protein 16-like (LOC100804941), mRNA	AT-hook motif nuclear-localized protein 16-like(LOC100804941)	coding protein	psRNATarget
XM_006590969.2	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   ||=|||||||||*|||||||||* targets:2237   AGUCUAACUCAACCCUACAAAAC   2259 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100797428 (LOC100797428), transcript variant X3, mRNA	uncharacterized LOC100797428(LOC100797428)	coding protein	psRNATarget
BT094198.1	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   |||||||||||||||*||||||* targets:257   AGCCUAACUCAAUCCCACAAAAC   279 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-18G8 unknown mRNA	NA	coding protein	psRNATarget
XM_003555145.3	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   |||||||||||||||*||||||* targets:2537   AGCCUAACUCAAUCCCACAAAAC   2559 Target Full Sequence	2.5	PREDICTED: Glycine max aluminum-activated malate transporter 12-like (LOC100796724), transcript variant X3, mRNA	aluminum-activated malate transporter 12-like(LOC100796724)	coding protein	psRNATarget
XM_014762132.1	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   ||=|||||||||*|||||||||* targets:1503   AGUCUAACUCAACCCUACAAAAC   1525 Target Full Sequence	2.5	PREDICTED: Glycine max SKP1-like protein 21 (LOC100775387), transcript variant X2, mRNA	SKP1-like protein 21(LOC100775387)	coding protein	psRNATarget
XM_014770446.1	ncRNA:23   UCGGAUUGAGUUAGGAUGUUUUA   1   **|=||||||*|||||||||||* targets:1132   UACUUAACUCCAUCCUACAAAAC   1154 Target Full Sequence	2.5	PREDICTED: Glycine max AT-hook motif nuclear-localized protein 16-like (LOC100788581), mRNA	AT-hook motif nuclear-localized protein 16-like(LOC100788581)	coding protein	psRNATarget