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BaseInfo

ncRNA ID novel_gma_miR8541
Species Glycine max
Class miRNA
Genome position Chr10:36634036-36634093 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 35 - UAUGUAUAGAUAGCCGAUGUUAAC - 58
Stem-loop(if miRNA) --   G    G              CUUA
  UAU UAUA AUAGCCGAUGUUAA    U
  ||| |||| ||||||||||||||
  AUA AUAU UAUUGGCUACAAUU    G
UA   A    G              ACAU
Stem-loop sequence UAUGUAUAGAUAGCCGAUGUUAACUUAUGUACAUUAACAUCGGUUAUGUAUAAAUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006594739.2
ncRNA:24   CAA---UUGUAGC-CGAUAGAUAUGUAU   1
  *||---|||||*|-||||||||||||||
targets:890   CUUCCAAACAUGGCGCUAUCUAUACAUA   917

3.0 PREDICTED: Glycine max organic cation/carnitine transporter 4-like (LOC100797665), mRNA organic cation/carnitine transporter 4-like(LOC100797665) coding protein psRNATarget
XM_003521869.3
ncRNA:24   CAAUUGUAGCCGAUAGAUAUGUAU   1
  *|*==|||=|*||||||||||||*
targets:1367   CUCGGCAUUGACUAUCUAUACAUU   1390

3.0 PREDICTED: Glycine max suppressor protein SRP40-like (LOC100804145), mRNA suppressor protein SRP40-like(LOC100804145) coding protein psRNATarget