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BaseInfo

ncRNA ID novel_gma_miR8540
Species Glycine max
Class miRNA
Genome position Chr14:31894071-31894220 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 127 - UUUUUGAGAACCGAUGUAGAAAGU - 150
Stem-loop(if miRNA) ---UU         C             A   ---U        AAUU    G C                    CUU
     UUUGAGAAC GAUGUAGAAAGUG UUU    AUAACAUC    UUAG C AAAACUGAUGUAGAAAGUGU   U
     ||||||||| ||||||||||||| |||    ||||||||    |||| | ||||||||||||||||||||   A
     AGAUUUUUG CUACAUCUUUCAC GAA    UGUUGUAG    AAUC G UUUUGAUUAUAUCUUUUAUA   A
CAACC         -             G   UUUU        --CC    A A                    CUA
Stem-loop sequence UUUUUGAGAACCGAUGUAGAAAGUGAUUUUAUAACAUCAAUUUUAGGCCAAAACUGAUGUAGAAAGUGUCUUUAAAUCAUAUUUUCUAUAUUAGUUUUAGACUAACCGAUGUUGUUUUUAAGGCACUUUCUACAUCGUUUUUAGACCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014761664.1
ncRNA:19   GAUGUAGCCAAGAGUUUUU   1
  |||||||||||*|||||||
targets:1   CUACAUCGGUUAUCAAAAA   19

1.5 PREDICTED: Glycine max protein spotted leaf 11-like (LOC102670410), mRNA protein spotted leaf 11-like(LOC102670410) coding protein psRNATarget