ncRNA ID | novel_gma_miR8540 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:31894071-31894220 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 127 - UUUUUGAGAACCGAUGUAGAAAGU - 150 |
Stem-loop(if miRNA) |
---UU         C             A   ---U        AAUU    G C                    CUU      UUUGAGAAC GAUGUAGAAAGUG UUU    AUAACAUC    UUAG C AAAACUGAUGUAGAAAGUGU   U      ||||||||| ||||||||||||| |||    ||||||||    |||| | ||||||||||||||||||||   A      AGAUUUUUG CUACAUCUUUCAC GAA    UGUUGUAG    AAUC G UUUUGAUUAUAUCUUUUAUA   A CAACC         -             G   UUUU        --CC    A A                    CUA |
Stem-loop sequence | UUUUUGAGAACCGAUGUAGAAAGUGAUUUUAUAACAUCAAUUUUAGGCCAAAACUGAUGUAGAAAGUGUCUUUAAAUCAUAUUUUCUAUAUUAGUUUUAGACUAACCGAUGUUGUUUUUAAGGCACUUUCUACAUCGUUUUUAGACCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014761664.1 |
|
1.5 | PREDICTED: Glycine max protein spotted leaf 11-like (LOC102670410), mRNA | protein spotted leaf 11-like(LOC102670410) | coding protein | psRNATarget |