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BaseInfo

ncRNA ID novel_gma_miR8530
Species Glycine max
Class miRNA
Genome position Chr10:41716910-41716994 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 62 - UUUUUCAUUAGUUAAUUUGUAGAU - 85
Stem-loop(if miRNA) --       U               UA         CUUUUA
  UUUUUCA UAGUUAAUUUGUAGA  UUUUCUCAU      A
  ||||||| |||||||||||||||  |||||||||      A
  AAAAAGU AUUAAUUAAACAUUU  AAAAGAGUA      A
UU       U               UC         UAUUAA
Stem-loop sequence UUUUUCAUUAGUUAAUUUGUAGAUAUUUUCUCAUCUUUUAAAAAAUUAUAUGAGAAAACUUUUACAAAUUAAUUAUUGAAAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003522083.3
ncRNA:24   UAGAUG-UUUAAUUGAUUACUUUUU   1
  **||=|-=|||||||||||||||||
targets:562   UGCUGCUGAAUUAACUAAUGAAAAA   586

3.0 PREDICTED: Glycine max non-specific lipid-transfer protein 1-like (LOC100818917), mRNA non-specific lipid-transfer protein 1-like(LOC100818917) coding protein psRNATarget