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BaseInfo

ncRNA ID novel_gma_miR8528
Species Glycine max
Class miRNA
Genome position Chr10:12073662-12073706 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 25 - AUUUAAAUUUAAGGAAGGACA - 45
Stem-loop(if miRNA) --  UC      --       UG
  UC  UCUUUA  UUUGAAU  C
  ||  ||||||  |||||||  U
  AG  AGGAAU  AAAUUUA  A
AC  GA      UU       CA
Stem-loop sequence UCUCUCUUUAUUUGAAUUGCUAACAUUUAAAUUUAAGGAAGGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519148.3
ncRNA:21   ACAGGAAGGAAUUUAAAUUUA   1
  |*|=||||=||||||||||||
targets:2056   UUUUCUUCUUUAAAUUUAAAU   2076

2.5 PREDICTED: Glycine max glucose-6-phosphate isomerase 1, chloroplastic (LOC100809452), mRNA glucose-6-phosphate isomerase 1, chloroplastic(LOC100809452) coding protein psRNATarget
AK244592.1
ncRNA:21   ACAGGAAGGAAUUUAAAUUUA   1
  |*|=||||=||||||||||||
targets:2128   UUUUCUUCUUUAAAUUUAAAU   2148

2.5 Glycine max cDNA, clone: GMFL01-07-I13 NA coding protein psRNATarget
XM_003549473.3
ncRNA:21   ACAGGAAGGAAUUUAAAUUUA   1
  ***|||||||||||||*||||
targets:167   CCGCCUUCCUUAAAUUCAAAU   187

2.5 PREDICTED: Glycine max HD domain-containing protein 2-like (LOC100819398), mRNA HD domain-containing protein 2-like(LOC100819398) coding protein psRNATarget