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BaseInfo

ncRNA ID novel_gma_miR8526
Species Glycine max
Class miRNA
Genome position Chr11:19199662-19199761 [-]
Reference genome Glycine_max_v2.0
Source SRR1451620
Length 21
Mature sequence(if miRNA) 1 - AUCAACUUGAUUCGUAAGCCU - 21
Stem-loop(if miRNA) --U     AG  G                C                 AUC
   CUUAC  AU AAGUUGAUCUGUAAGC UCAUACGGAUCAAGUUG   C
   |||||  || |||||||||||||||| |||||||||||||||||
   GAAUG  UA UUCAACUAGGCAUUCG AGUAUGUCUAGUUCAAC   G
UCC     CU  G                A                 AAU
Stem-loop sequence UCUUACAGAUGAAGUUGAUCUGUAAGCCUCAUACGGAUCAAGUUGAUCCGUAACAACUUGAUCUGUAUGAAGCUUACGGAUCAACUUGAUUCGUAAGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006593444.2
ncRNA:21   UCCGAAUGCUUAGUUCAACUA   1
  |*||*||||=|||||||||||
targets:3672   AAGCAUACGGAUCAAGUUGAU   3692

2.5 PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841) coding protein psRNATarget