ncRNA ID | novel_gma_miR8522 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:27660218-27660364 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451620 |
Length | 22 |
Mature sequence(if miRNA) | 126 - UCACCAAUCUGUGCUUCUUCCU - 147 |
Stem-loop(if miRNA) |
--UC      C       C      G                     C     A          -              ACCAAU UGUGCUU UUCCUC UCUACUAGCUCAAUAUCUUUC UUUCA CUUUUGUUUU GUAAAUUAUA     |||||| ||||||| |||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||G     UGGUUA ACACGGA AAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GGAAACGAAA CAUUUGAUGU GUCC      A       C      G                     U     -          A          |
Stem-loop sequence | UCACCAAUCUGUGCUUCUUCCUCGUCUACUAGCUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUAUAGUGUAGUUUACAAAAGCAAAGGUGAAAUGAAAGAUAUUGAGCUGGUAGAGGAGGAACAGGCACAAAUUGGUCCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014769888.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100792447 (LOC100792447), mRNA | uncharacterized LOC100792447(LOC100792447) | coding protein | psRNATarget | |||||||||
XM_003531577.3 |
|
2.5 | PREDICTED: Glycine max ABC transporter C family member 8-like (LOC100784827), mRNA | ABC transporter C family member 8-like(LOC100784827) | coding protein | psRNATarget |