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BaseInfo

ncRNA ID novel_gma_miR8521
Species Glycine max
Class miRNA
Genome position Chr7:13102385-13102530 [-]
Reference genome Glycine_max_v2.0
Source SRR1451620
Length 22
Mature sequence(if miRNA) 1 - UUGGGGACCAAAUUGAUUCAUU - 22
Stem-loop(if miRNA) --UAAU                   ---     A  GU           AC             ----AU     A
      UCAAUUUGGUUCUCAAAUU   UUUAA AG  UCAAUUUGGUC  CAAGUUCUUAAAA      AAAUC A
      |||||||||||||||||||   ||||| ||  |||||||||||  |||||||||||||      ||||| U
      AGUUAAACCAGGGGUUUAA   AAGUU UC  GGUUAAACUAG  GUUCAAGAAUUUU      UUUGG U
UUACUU                   UAA     G  AG           AA             AAAACC     U
Stem-loop sequence UAAUUCAAUUUGGUUCUCAAAUUUUUAAAAGGUUCAAUUUGGUCACCAAGUUCUUAAAAAUAAAUCAAUUUGGUUUCCAAAAUUUUAAGAACUUGAAGAUCAAAUUGGGACUGUUGAAAAUAAUUUGGGGACCAAAUUGAUUCAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547028.3
ncRNA:22   UUACUUAGUUAAACCAGGGGUU   1
  *=*|=|||||||||||||=|||
targets:2618   UGGGGAUCAAUUUGGUCCUCAA   2639

2.5 PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X2, mRNA probable protein phosphatase 2C 62(LOC100815469) coding protein psRNATarget
XM_014768080.1
ncRNA:22   UUACUUAGUUAAACCAGGGGUU   1
  *=*|=|||||||||||||=|||
targets:2630   UGGGGAUCAAUUUGGUCCUCAA   2651

2.5 PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X1, mRNA probable protein phosphatase 2C 62(LOC100815469) coding protein psRNATarget