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BaseInfo

ncRNA ID	novel_gma_miR8520
Species	Glycine max
Class	miRNA
Genome position	Chr7:4528148-4528237 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451620
Length	21
Mature sequence(if miRNA)	70 - AAGUGAAACUUCAAUUCUGAU - 90
Stem-loop(if miRNA)	--                     A       CA    --AAA   A   CAGAAUUGAAGUUUCGCUUUG UAAUCCG  UAAU     GAU U   ||||||||||||||||||||| |||||||  ||||     |||   GUCUUAACUUCAAAGUGAAGC AUUAGGU  AUUA     UUA G UA                     A       CC    GAAAG   U
Stem-loop sequence	CAGAAUUGAAGUUUCGCUUUGAUAAUCCGCAUAAUAAAGAUAUGUAUUGAAAGAUUACCUGGAUUAACGAAGUGAAACUUCAAUUCUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK243773.1	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   *|=|||||||||||||||||| targets:829   UUUAGAAUUGAAGUUUCACUU   849 Target Full Sequence	1.0	Glycine max cDNA, clone: GMFL01-01-D14	NA	coding protein	psRNATarget
XM_006590583.2	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   |||||||||||||||||||*| targets:1154   AUCAGAAUUGAAGUUUCACGU   1174 Target Full Sequence	1.5	PREDICTED: Glycine max cyclin-D3-3-like (LOC100807175), transcript variant X2, mRNA	cyclin-D3-3-like(LOC100807175)	coding protein	psRNATarget
XM_003538758.3	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   |||||||||||||||||||*| targets:1187   AUCAGAAUUGAAGUUUCACGU   1207 Target Full Sequence	1.5	PREDICTED: Glycine max cyclin-D3-3-like (LOC100807175), transcript variant X1, mRNA	cyclin-D3-3-like(LOC100807175)	coding protein	psRNATarget
XM_003516562.3	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   |||||||||||||||||||*| targets:1262   AUCAGAAUUGAAGUUUCACCU   1282 Target Full Sequence	1.5	PREDICTED: Glycine max cyclin-D3-2-like (LOC100802683), mRNA	cyclin-D3-2-like(LOC100802683)	coding protein	psRNATarget
BT093223.1	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   ||=|||||||=|||||||||| targets:813   AUUAGAAUUGGAGUUUCACUU   833 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-14A13 unknown mRNA	NA	coding protein	psRNATarget
NM_001317476.2	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   ||=|||||||=|||||||||| targets:892   AUUAGAAUUGGAGUUUCACUU   912 Target Full Sequence	2.5	Glycine max uncharacterized LOC100800312 (LOC100800312), mRNA	uncharacterized LOC100800312(LOC100800312)	coding protein	psRNATarget
XM_014770913.1	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   ||||*|||||=|||||||||| targets:1532   AUCAUAAUUGGAGUUUCACUU   1552 Target Full Sequence	2.5	PREDICTED: Glycine max mitochondrial import inner membrane translocase subunit TIM22-3-like (LOC100812694), mRNA	mitochondrial import inner membrane translocase subunit TIM22-3-like(LOC100812694)	coding protein	psRNATarget
AK285528.1	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   ||||*||||||||||||||*| targets:1933   AUCAAAAUUGAAGUUUCACCU   1953 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-10-P20	NA	coding protein	psRNATarget
XM_003524477.3	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   ||||*||||||||||||||*| targets:1943   AUCAAAAUUGAAGUUUCACCU   1963 Target Full Sequence	2.5	PREDICTED: Glycine max 3-ketoacyl-CoA synthase 11-like (LOC100817884), mRNA	3-ketoacyl-CoA synthase 11-like(LOC100817884)	coding protein	psRNATarget
XM_003547962.3	ncRNA:21   UAGUCUUAACUUCAAAGUGAA   1   *||*|||||||||||||*||| targets:47   CUCCGAAUUGAAGUUUCCCUU   67 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100793647 (LOC100793647), mRNA	uncharacterized LOC100793647(LOC100793647)	coding protein	psRNATarget
XM_003530480.3	ncRNA:21   UAGUCUU-AACUUCAAAGUGAA   1   **|||||-|||||||||||||* targets:1673   UCCAGAAGUUGAAGUUUCACUA   1694 Target Full Sequence	3.0	PREDICTED: Glycine max serine/threonine-protein kinase At5g01020-like (LOC100819547), transcript variant X1, mRNA	serine/threonine-protein kinase At5g01020-like(LOC100819547)	coding protein	psRNATarget