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BaseInfo

ncRNA ID	novel_gma_miR8517
Species	Glycine max
Class	miRNA
Genome position	Chr1:51168-51272 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451620
Length	21
Mature sequence(if miRNA)	85 - CAGAAGUUGCUUUACUAGAAC - 105
Stem-loop(if miRNA)	--             A           U  ----U    CAGAAGUUUCUAGAA   CAGAAGUUGCUUU CUAGAACUCUC CA     GAAC               U   ||||||||||||| ||||||||||| ||     ||||               U   GUCUUCAACGAAA GAUCUUGAGAG GU     UCUU               A UG             C           U  UUGUU    AUCAAUGUUACCUUG
Stem-loop sequence	CAGAAGUUGCUUUACUAGAACUCUCUCAUGAACCAGAAGUUUCUAGAAUUAGUUCCAUUGUAACUAUUCUUUGUUUGUGAGAGUUCUAGCAAAGCAACUUCUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK244425.1	ncRNA:21   CAAGAUCAUUUCGUUGAAGAC   1   |**|||||||*|||||||||| targets:343   GGGCUAGUAAUGCAACUUCUG   363 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-02-P15	NA	coding protein	psRNATarget
NM_001254197.2	ncRNA:21   CAAGAUCAUUUCGUUGAAGAC   1   |**|||||||*|||||||||| targets:338   GGGCUAGUAAUGCAACUUCUG   358 Target Full Sequence	2.5	Glycine max protein transport protein Sec61 subunit alpha-like (LOC100798372), mRNA	protein transport protein Sec61 subunit alpha-like(LOC100798372)	coding protein	psRNATarget
AK286265.1	ncRNA:21   CAAGAUCAUUUCGUUGAAGAC   1   |**|||||||*|||||||||| targets:343   GGGCUAGUAAUGCAACUUCUG   363 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-25-B23	NA	coding protein	psRNATarget
XM_003540446.3	ncRNA:21   CAAGAUCAUUUCGUUGAAGAC   1   |**|||||||*|||||||||| targets:453   GGGCUAGUAAUGCAACUUCUG   473 Target Full Sequence	2.5	PREDICTED: Glycine max protein transport protein Sec61 subunit alpha (LOC100809703), transcript variant X1, mRNA	protein transport protein Sec61 subunit alpha(LOC100809703)	coding protein	psRNATarget
XM_006593382.2	ncRNA:21   CAAGAUCAUUUCGUUGAAGAC   1   |**|||||||*|||||||||| targets:462   GGGCUAGUAAUGCAACUUCUG   482 Target Full Sequence	2.5	PREDICTED: Glycine max protein transport protein Sec61 subunit alpha-like (LOC100798372), transcript variant X1, mRNA	protein transport protein Sec61 subunit alpha-like(LOC100798372)	coding protein	psRNATarget
XM_006592875.2	ncRNA:21   CAAGAUCAUUUCGUUGAAGAC   1   |**|||||||*|||||||||| targets:509   GGGCUAGUAAUGCAACUUCUG   529 Target Full Sequence	2.5	PREDICTED: Glycine max protein transport protein Sec61 subunit alpha (LOC100809703), transcript variant X2, mRNA	protein transport protein Sec61 subunit alpha(LOC100809703)	coding protein	psRNATarget