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BaseInfo

ncRNA ID novel_gma_miR8516
Species Glycine max
Class miRNA
Genome position Chr6:20324574-20324622 [+]
Reference genome Glycine_max_v2.0
Source SRR1451620;SRR1451622
Length 21
Mature sequence(if miRNA) 1 - UUGAGAACCGUCUUAGAAUGU - 21
Stem-loop(if miRNA) --       -           UGUG
  UUGAGAA CCGUCUUAGAA    U
  ||||||| |||||||||||
  AACUUUU GGCAGAAUCUU    A
AG       U           UUUA
Stem-loop sequence UUGAGAACCGUCUUAGAAUGUGUAAUUUUUCUAAGACGGUUUUUCAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006599676.2
ncRNA:21   UGUAAGAUUCUGCCAAGAGUU   1
  *|||*||||||||||*|||||
targets:901   UCAUGCUAAGACGGUGCUCAA   921

2.5 PREDICTED: Glycine max mannan endo-1,4-beta-mannosidase 6-like (LOC100789254), transcript variant X2, mRNA mannan endo-1,4-beta-mannosidase 6-like(LOC100789254) coding protein psRNATarget
XM_003548282.3
ncRNA:21   UGUAAGAUUCUGCCAAGAGUU   1
  *|||*||||||||||*|||||
targets:902   UCAUGCUAAGACGGUGCUCAA   922

2.5 PREDICTED: Glycine max mannan endo-1,4-beta-mannosidase 6-like (LOC100789254), transcript variant X1, mRNA mannan endo-1,4-beta-mannosidase 6-like(LOC100789254) coding protein psRNATarget