ncRNA ID | novel_gma_miR8516 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:20324574-20324622 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451620;SRR1451622 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGAGAACCGUCUUAGAAUGU - 21 |
Stem-loop(if miRNA) |
--       -           UGUG   UUGAGAA CCGUCUUAGAA    U   ||||||| |||||||||||   AACUUUU GGCAGAAUCUU    A AG       U           UUUA |
Stem-loop sequence | UUGAGAACCGUCUUAGAAUGUGUAAUUUUUCUAAGACGGUUUUUCAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006599676.2 |
|
2.5 | PREDICTED: Glycine max mannan endo-1,4-beta-mannosidase 6-like (LOC100789254), transcript variant X2, mRNA | mannan endo-1,4-beta-mannosidase 6-like(LOC100789254) | coding protein | psRNATarget | |||||||||
XM_003548282.3 |
|
2.5 | PREDICTED: Glycine max mannan endo-1,4-beta-mannosidase 6-like (LOC100789254), transcript variant X1, mRNA | mannan endo-1,4-beta-mannosidase 6-like(LOC100789254) | coding protein | psRNATarget |