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BaseInfo

ncRNA ID novel_gma_miR8512
Species Glycine max
Class miRNA
Genome position Chr5:31409735-31409829 [+]
Reference genome Glycine_max_v2.0
Source SRR1451620
Length 21
Mature sequence(if miRNA) 1 - UAGUGUGUUUGGAUGGAGUAA - 21
Stem-loop(if miRNA) --  G G    UG  UG  G  A    -AUA GG   UUUAUUUUUUCA
  UA U UGUU  GA  GA UA UUUA    G  AAA            A
  || | ||||  ||  || || ||||    |  |||
  AU A AUAG  UU  UU AU AAAU    C  UUA            G
UU  G G    GU  GU  G  A    AGUG --   GUAAAAUUUAAG
Stem-loop sequence UAGUGUGUUUGGAUGGAGUAAUUUAAUAGGGAAAUUUAUUUUUUCAAGGAAUUUAAAAUGAUUCGUGAUAAAAUAGUUUGUUUGGAUAGAGUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573682.2
ncRNA:21   AAUGAGGUAGGUUUGUGUGAU   1
  |*|*|||=||||||||||||=
targets:61   UGAAUCCGUCCAAACACACUG   81

3.0 PREDICTED: Glycine max protein TPX2-like (LOC100806215), transcript variant X1, mRNA protein TPX2-like(LOC100806215) coding protein psRNATarget
XM_006573683.2
ncRNA:21   AAUGAGGUAGGUUUGUGUGAU   1
  |*|*|||=||||||||||||=
targets:66   UGAAUCCGUCCAAACACACUG   86

3.0 PREDICTED: Glycine max protein TPX2-like (LOC100806215), transcript variant X2, mRNA protein TPX2-like(LOC100806215) coding protein psRNATarget
XM_006595853.2
ncRNA:21   AAUGAGGUAGGUUUGUGUGAU   1
  *|=|*||*|||||||||||||
targets:97   CUGCACCUUCCAAACACACUA   117

3.0 PREDICTED: Glycine max glucose-induced degradation protein 8 homolog (LOC100813665), transcript variant X1, mRNA glucose-induced degradation protein 8 homolog(LOC100813665) coding protein psRNATarget