ncRNA ID | novel_gma_miR8512 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:31409735-31409829 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451620 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAGUGUGUUUGGAUGGAGUAA - 21 |
Stem-loop(if miRNA) |
--  G G    UG  UG  G  A    -AUA GG   UUUAUUUUUUCA   UA U UGUU  GA  GA UA UUUA    G  AAA            A   || | ||||  ||  || || ||||    |  |||   AU A AUAG  UU  UU AU AAAU    C  UUA            G UU  G G    GU  GU  G  A    AGUG --   GUAAAAUUUAAG |
Stem-loop sequence | UAGUGUGUUUGGAUGGAGUAAUUUAAUAGGGAAAUUUAUUUUUUCAAGGAAUUUAAAAUGAUUCGUGAUAAAAUAGUUUGUUUGGAUAGAGUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006573682.2 |
|
3.0 | PREDICTED: Glycine max protein TPX2-like (LOC100806215), transcript variant X1, mRNA | protein TPX2-like(LOC100806215) | coding protein | psRNATarget | |||||||||
XM_006573683.2 |
|
3.0 | PREDICTED: Glycine max protein TPX2-like (LOC100806215), transcript variant X2, mRNA | protein TPX2-like(LOC100806215) | coding protein | psRNATarget | |||||||||
XM_006595853.2 |
|
3.0 | PREDICTED: Glycine max glucose-induced degradation protein 8 homolog (LOC100813665), transcript variant X1, mRNA | glucose-induced degradation protein 8 homolog(LOC100813665) | coding protein | psRNATarget |