ncRNA ID | novel_gma_miR8500 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:30263514-30263670 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451620 |
Length | 24 |
Mature sequence(if miRNA) | 134 - CAACCCGUAAGCACCAAGGUUAGU - 157 |
Stem-loop(if miRNA) |
--UU    -      AUA U     C    UUCUUU      CAAUUC       CA  CUU     -     -------      A     ACCU GGUGUU   G GGUUG UUGU      UUCUUU      UUCCUUU  GU   GGUAA UUUCU       GGAUCA A     |||| ||||||   | ||||| ||||      ||||||      |||||||  ||   ||||| |||||       ||||||     UGGA CCACGA   C CCAAC AACA      AAGAAA      AAGGAAA  CA   CCAUU AAAGA       UUUAGU U UGAU    A      AUG -     -    UCCCAC      -----A       UA  -UU     U     ACGUCUA      G |
Stem-loop sequence | UUACCUGGUGUUAUAGUGGUUGCUUGUUUCUUUUUCUUUCAAUUCUUCCUUUCAGUCUUGGUAAUUUCUGGAUCAAAUGUGAUUUAUCUGCAAGAAAUUUACCUUACAUAAAGGAAAAAAGAACACCCUACAACAACCCGUAAGCACCAAGGUUAGU |