Search result

BaseInfo

ncRNA ID	novel_gma_miR8492
Species	Glycine max
Class	miRNA
Genome position	Chr17:31321434-31321480 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451620
Length	21
Mature sequence(if miRNA)	1 - UUGUUGCGGAUCAAGUUGAUC - 21
Stem-loop(if miRNA)	--               -UGUA A   UCAACUUGAUCCGCA     G U   |||||||||||||||     |   AGUUGAACUAGGCGU     C U CU               UGUUG U
Stem-loop sequence	UCAACUUGAUCCGCAUGUAGAUUUCGUUGUUGCGGAUCAAGUUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006583189.2	ncRNA:21   CUAGUUGAACUAGGCGUUGUU   1   |=*|||||||||||*|||||| targets:851   GGCCAACUUGAUCCACAACAA   871 Target Full Sequence	2.5	PREDICTED: Glycine max probable indole-3-acetic acid-amido synthetase GH3.5 (LOC100813492), transcript variant X4, mRNA	probable indole-3-acetic acid-amido synthetase GH3.5(LOC100813492)	coding protein	psRNATarget
XM_006583187.2	ncRNA:21   CUAGUUGAACUAGGCGUUGUU   1   |=*|||||||||||*|||||| targets:971   GGCCAACUUGAUCCACAACAA   991 Target Full Sequence	2.5	PREDICTED: Glycine max probable indole-3-acetic acid-amido synthetase GH3.5 (LOC100813492), transcript variant X2, mRNA	probable indole-3-acetic acid-amido synthetase GH3.5(LOC100813492)	coding protein	psRNATarget
XM_003528754.3	ncRNA:21   CUAGUUGAACUAGGCGUUGUU   1   |=*|||||||||||*|||||| targets:989   GGCCAACUUGAUCCACAACAA   1009 Target Full Sequence	2.5	PREDICTED: Glycine max probable indole-3-acetic acid-amido synthetase GH3.5 (LOC100813492), transcript variant X1, mRNA	probable indole-3-acetic acid-amido synthetase GH3.5(LOC100813492)	coding protein	psRNATarget
XM_006583188.2	ncRNA:21   CUAGUUGAACUAGGCGUUGUU   1   |=*|||||||||||*|||||| targets:1292   GGCCAACUUGAUCCACAACAA   1312 Target Full Sequence	2.5	PREDICTED: Glycine max probable indole-3-acetic acid-amido synthetase GH3.5 (LOC100813492), transcript variant X3, mRNA	probable indole-3-acetic acid-amido synthetase GH3.5(LOC100813492)	coding protein	psRNATarget
XM_014763990.1	ncRNA:21   CUAGUUGAACUAGGCGUUGUU   1   *||*||||||*|||||||||| targets:1343   CAUGAACUUGUUCCGCAACAA   1363 Target Full Sequence	2.5	PREDICTED: Glycine max receptor protein kinase CLAVATA1-like (LOC102664073), mRNA	receptor protein kinase CLAVATA1-like(LOC102664073)	coding protein	psRNATarget