Search result

BaseInfo

ncRNA ID novel_gma_miR8479
Species Glycine max
Class miRNA
Genome position Chr14:9267334-9267407 [+]
Reference genome Glycine_max_v2.0
Source SRR1294476
Length 24
Mature sequence(if miRNA) 1 - ACCAAACGUUUUCCGGAAGAACCC - 24
Stem-loop(if miRNA) --A          U         C   G        A
   CCAAACGUUU CCGGAAGAA CCU CUUCCGGA A
   |||||||||| ||||||||| ||| |||||||| C
   GGUUUGCAAA GGCCUUCUU GGA GAAGGCCU U
UAG          -         U   A        U
Stem-loop sequence ACCAAACGUUUUCCGGAAGAACCCUGCUUCCGGAAACUUUCCGGAAGAAGGUUUCUUCCGGAAACGUUUGGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518867.3
ncRNA:24   CCCAAGAAGGCCUUUUGCAAACCA   1
  ||***||||*||||||=|||||||
targets:1274   GGAAGCUUCGGGAAAAUGUUUGGU   1297

2.5 PREDICTED: Glycine max uncharacterized LOC100791409 (LOC100791409), mRNA uncharacterized LOC100791409(LOC100791409) coding protein psRNATarget