ncRNA ID | novel_gma_miR8478 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:2634722-2634817 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451620 |
Length | 21 |
Mature sequence(if miRNA) | 76 - AUCAUCCAAUCACAACCUACC - 96 |
Stem-loop(if miRNA) |
--     C         CC    AU  A    A      --U     UUU   AUCAU CAAUCACAA  UACC  GU GGAU AGUUUG   UGAUU   A   ||||| |||||||||  ||||  || |||| ||||||   |||||   UAGUA GUUAGUGUU  GUGG  CA CUUA UUAAAU   AUUAA   A GA     A         UA    --  A    A      UCU     UAA |
Stem-loop sequence | AUCAUCCAAUCACAACCUACCAUGUAGGAUAAGUUUGUUGAUUUUUAAAAUAAUUAUCUUAAAUUAAUUCAACGGUGAUUUGUGAUUGAAUGAUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003542461.3 |
|
2.5 | PREDICTED: Glycine max syntaxin-71-like (LOC100786529), mRNA | syntaxin-71-like(LOC100786529) | coding protein | psRNATarget | |||||||||
XM_003542461.3 |
|
2.5 | PREDICTED: Glycine max syntaxin-71-like (LOC100786529), mRNA | syntaxin-71-like(LOC100786529) | coding protein | psRNATarget | |||||||||
XM_003542461.3 |
|
2.5 | PREDICTED: Glycine max syntaxin-71-like (LOC100786529), mRNA | syntaxin-71-like(LOC100786529) | coding protein | psRNATarget |