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BaseInfo

ncRNA ID novel_gma_miR8477
Species Glycine max
Class miRNA
Genome position Chr10:31982418-31982497 [+]
Reference genome Glycine_max_v2.0
Source SRR1451620
Length 21
Mature sequence(if miRNA) 60 - CAGAGAAUCGUCUUAGAAUGU - 80
Stem-loop(if miRNA) --                   G    CU  CUUAA    U
  AUUCUAAGACGGUUCUUUG AAAA  GU     AAAG C
  ||||||||||||||||||| ||||  ||     ||||
  UAAGAUUCUGCUAAGAGAC UUUU  UA     UUUC U
UG                   A    AG  UACUC    A
Stem-loop sequence AUUCUAAGACGGUUCUUUGGAAAACUGUCUUAAAAAGUCUACUUUCUCAUAUGAUUUUACAGAGAAUCGUCUUAGAAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:21   UGUAAGAUUCUGCUAAGAGAC   1
  |||||||||||||=|||||||
targets:2609   ACAUUCUAAGACGGUUCUCUG   2629

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget