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BaseInfo

ncRNA ID novel_gma_miR8461
Species Glycine max
Class miRNA
Genome position Chr3:8014361-8014456 [-]
Reference genome Glycine_max_v2.0
Source SRR1451619
Length 24
Mature sequence(if miRNA) 1 - CAUGAAAUGGACAGCUCAUAAUGC - 24
Stem-loop(if miRNA) --                C                -----C    CUCU G
  AUUAUGAGUUGUCCAU UCAUGUCAGUUUUGCA      ACGU    A A
  |||||||||||||||| ||||||||||||||||      ||||    |
  UAAUACUCGACAGGUA AGUACAGUCAAAAUGU      UGUA    U A
CG                A                CCACUA    -AAU A
Stem-loop sequence AUUAUGAGUUGUCCAUCUCAUGUCAGUUUUGCACACGUCUCUAGAAAUUAAAUGUAUCACCUGUAAAACUGACAUGAAAUGGACAGCUCAUAAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544475.3
ncRNA:24   CGUAAUACUCGACAGGUAAAGUAC   1
  |=||-|||||*||||*||||||||
targets:1641   GUAU-AUGAGAUGUCAAUUUCAUG   1663

2.5 PREDICTED: Glycine max uncharacterized LOC100814552 (LOC100814552), mRNA uncharacterized LOC100814552(LOC100814552) coding protein psRNATarget