ncRNA ID | ath-miR8165 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr3:16538489-16538625 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 22 - AAUGGAGGCAAGUGUGAAGGA - 42 |
Stem-loop(if miRNA) |
     C    AA    A    AAUUA  G    A      -A    A       GU      UC    AAC GAUUG UAUA  GUGU AAAU     UC UUCA ACUUGU  CUAU UGAUUUG  GUUUUG  UUUA   U ||||| ||||  |||| ||||     || |||| ||||||  |||| |||||||  ||||||  |||| UUAAC AUGU  CACA UUUA     AG AAGU UGAACG  GGUA AUUAAAU  CAAAAU  AAAU   C      -    AG    C    ----G  G    G      GA    -       AU      GA    CUA |
Stem-loop sequence | GAUUGCUAUAAAGUGUAAAAUAAUUAUCGUUCAAACUUGUACUAUAUGAUUUGGUGUUUUGUCUUUAAACUCAUCUAAAAGUAAAACUAUAAAUUAAUGGAGGCAAGUGUGAAGGAGAUUUCACACGAUGUACAAUU |
1 | PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots"; Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA; BMC Genomics. 14:701(2013). |