ncRNA ID | novel_gma_miR8443 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:22315234-22315317 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451619;SRR1451620 |
Length | 21 |
Mature sequence(if miRNA) | 64 - CCAUCCCCAAUUGCCCACCUU - 84 |
Stem-loop(if miRNA) |
--     -    C   U     --C  AAAAC  AUAUCCCAUU   GGUGG CAAU GGG GAUGG   GC     AA          U   ||||| |||| ||| |||||   ||     ||          C   CCACC GUUA CCC CUACC   CG     CG          C UU     C    A   -     ACA  -AAUA  GACCUGAACA |
Stem-loop sequence | GGUGGCAAUCGGGUGAUGGCGCAAAACAAAUAUCCCAUUUCCACAAGUCCAGGCAUAAGCACACCAUCCCCAAUUGCCCACCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003534663.3 |
|
2.5 | PREDICTED: Glycine max probable F-box protein At4g22030 (LOC100801646), mRNA | probable F-box protein At4g22030(LOC100801646) | coding protein | psRNATarget | |||||||||
XM_003534659.3 |
|
2.5 | PREDICTED: Glycine max probable F-box protein At4g22030 (LOC100799496), mRNA | probable F-box protein At4g22030(LOC100799496) | coding protein | psRNATarget |