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BaseInfo

ncRNA ID novel_gma_miR8439
Species Glycine max
Class miRNA
Genome position Chr1:51535134-51535231 [+]
Reference genome Glycine_max_v2.0
Source SRR1451619
Length 24
Mature sequence(if miRNA) 1 - ACUGUCACAUGUCAUGUUCUGAUU - 24
Stem-loop(if miRNA) --       C                 ACCAAUAACA   ACAAUGUAUU
  ACUGUCA AUGUCAUGUUCUGAUUG          ACA          U
  ||||||| |||||||||||||||||          |||          C
  UGACAGU UACAGUACAAGACUAAC          UGA          A
AC       A                 ---CUACAGU   AGUACUUUCU
Stem-loop sequence ACUGUCACAUGUCAUGUUCUGAUUGACCAAUAACAACAACAAUGUAUUUCAUCUUUCAUGAAGUUGACAUCCAAUCAGAACAUGACAUAUGACAGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602607.2
ncRNA:24   UUAGUCUUGUACUGUACACUGUCA   1
  |||*|||||=||||||*|||||||
targets:670   AAUAAGAACGUGACAUAUGACAGU   693

2.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget