ncRNA ID | novel_gma_miR8439 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:51535134-51535231 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451619 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUGUCACAUGUCAUGUUCUGAUU - 24 |
Stem-loop(if miRNA) |
--       C                 ACCAAUAACA   ACAAUGUAUU   ACUGUCA AUGUCAUGUUCUGAUUG          ACA          U   ||||||| |||||||||||||||||          |||          C   UGACAGU UACAGUACAAGACUAAC          UGA          A AC       A                 ---CUACAGU   AGUACUUUCU |
Stem-loop sequence | ACUGUCACAUGUCAUGUUCUGAUUGACCAAUAACAACAACAAUGUAUUUCAUCUUUCAUGAAGUUGACAUCCAAUCAGAACAUGACAUAUGACAGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602607.2 |
|
2.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget |