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BaseInfo

ncRNA ID novel_gma_miR8426
Species Glycine max
Class miRNA
Genome position Chr12:28158949-28159060 [-]
Reference genome Glycine_max_v2.0
Source SRR1294476
Length 24
Mature sequence(if miRNA) 89 - GAGAAUUUUUUGCUAACGUCGGCC - 112
Stem-loop(if miRNA) --        UUU     C      --C     UU  U       U     UCCA  U
  GAGAAUUU   GCUAA GUCGGC   AAAGA  UU UUGGUCG UGUCA    GG U
  ||||||||   ||||| ||||||   |||||  || ||||||| |||||    || U
  UUUUUAGA   CGGUU CAGCCG   UUUUU  AG AAUCAGU AUAGU    CU U
UU        --U     A      UUU     UU  U       U     -UGA  U
Stem-loop sequence GAGAAUUUUUUGCUAACGUCGGCCAAAGAUUUUUUUGGUCGUUGUCAUCCAGGUUUUUUCAGUUGAUAUUGACUAAUGAUUUUUUUUUUGCCGACAUUGGCUAGAUUUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT093666.1
ncRNA:24   CCGGCUGCAAUCGUUUUUUAAGAG   1
  **==||||||||||||||=||||=
targets:352   UAUUGACGUUAGCAAAAAGUUCUU   375

2.5 Soybean clone JCVI-FLGm-17J13 unknown mRNA NA coding protein psRNATarget
NM_001317566.1
ncRNA:24   CCGGCUGCAAUCGUUUUUUAAGAG   1
  **==||||||||||||||=||||=
targets:352   UAUUGACGUUAGCAAAAAGUUCUU   375

2.5 Glycine max uncharacterized LOC100817544 (LOC100817544), mRNA uncharacterized LOC100817544(LOC100817544) coding protein psRNATarget
XM_006579480.2
ncRNA:24   CCGGCUGCAAUCGUUUUUUAAGAG   1
  **==||||||||||||||=||||=
targets:387   UAUUGACGUUAGCAAAAAGUUCUU   410

2.5 PREDICTED: Glycine max uncharacterized LOC100817544 (LOC100817544), transcript variant X2, mRNA uncharacterized LOC100817544(LOC100817544) coding protein psRNATarget