ncRNA ID | novel_gma_miR8426 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:28158949-28159060 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294476 |
Length | 24 |
Mature sequence(if miRNA) | 89 - GAGAAUUUUUUGCUAACGUCGGCC - 112 |
Stem-loop(if miRNA) |
--        UUU     C      --C     UU  U       U     UCCA  U   GAGAAUUU   GCUAA GUCGGC   AAAGA  UU UUGGUCG UGUCA    GG U   ||||||||   ||||| ||||||   |||||  || ||||||| |||||    || U   UUUUUAGA   CGGUU CAGCCG   UUUUU  AG AAUCAGU AUAGU    CU U UU        --U     A      UUU     UU  U       U     -UGA  U |
Stem-loop sequence | GAGAAUUUUUUGCUAACGUCGGCCAAAGAUUUUUUUGGUCGUUGUCAUCCAGGUUUUUUCAGUUGAUAUUGACUAAUGAUUUUUUUUUUGCCGACAUUGGCUAGAUUUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT093666.1 |
|
2.5 | Soybean clone JCVI-FLGm-17J13 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001317566.1 |
|
2.5 | Glycine max uncharacterized LOC100817544 (LOC100817544), mRNA | uncharacterized LOC100817544(LOC100817544) | coding protein | psRNATarget | |||||||||
XM_006579480.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100817544 (LOC100817544), transcript variant X2, mRNA | uncharacterized LOC100817544(LOC100817544) | coding protein | psRNATarget |