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BaseInfo

ncRNA ID novel_gma_miR8418
Species Glycine max
Class miRNA
Genome position Chr2:21238818-21238869 [-]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 24
Mature sequence(if miRNA) 29 - UUUUGGAGAAUCGAUGUUAACAUA - 52
Stem-loop(if miRNA) --U                 AA   A
   UUUGGAGAAUCGAUGUU  CAU C
   |||||||||||||||||  |||
   AAACCUCUUGGCUACAA  GUA A
CAU                 CA   U
Stem-loop sequence UUUUGGAGAAUCGAUGUUAACAUACAUAUGACAACAUCGGUUCUCCAAAUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532355.3
ncRNA:24   AUACAAUUGUAGCUAAGAGGUUUU   1
  |=*|*||||||*|||||||||||*
targets:947   UGCGGUAACAUGGAUUCUCCAAAC   970

2.5 PREDICTED: Glycine max methyl-CpG-binding domain-containing protein 13-like (LOC100807457), transcript variant X2, mRNA methyl-CpG-binding domain-containing protein 13-like(LOC100807457) coding protein psRNATarget
XM_003532355.3
ncRNA:24   AUACAAUUGUAGCUAAGAGGUUUU   1
  |=***||||||*|||||||||||*
targets:836   UGCAGUAACAUGGAUUCUCCAAAC   859

2.5 PREDICTED: Glycine max methyl-CpG-binding domain-containing protein 13-like (LOC100807457), transcript variant X2, mRNA methyl-CpG-binding domain-containing protein 13-like(LOC100807457) coding protein psRNATarget
XM_014778624.1
ncRNA:24   AUACAAUUGUAGCUAAGAGGUUUU   1
  |=*|*||||||*|||||||||||*
targets:1029   UGCGGUAACAUGGAUUCUCCAAAC   1052

2.5 PREDICTED: Glycine max methyl-CpG-binding domain-containing protein 13-like (LOC100807457), transcript variant X3, mRNA methyl-CpG-binding domain-containing protein 13-like(LOC100807457) coding protein psRNATarget
XM_014778624.1
ncRNA:24   AUACAAUUGUAGCUAAGAGGUUUU   1
  |=***||||||*|||||||||||*
targets:918   UGCAGUAACAUGGAUUCUCCAAAC   941

2.5 PREDICTED: Glycine max methyl-CpG-binding domain-containing protein 13-like (LOC100807457), transcript variant X3, mRNA methyl-CpG-binding domain-containing protein 13-like(LOC100807457) coding protein psRNATarget
XM_006584644.2
ncRNA:24   AUACAAUUGUAGCUAAGAGGUUUU   1
  |=*|*||||||*|||||||||||*
targets:1102   UGCGGUAACAUGGAUUCUCCAAAC   1125

2.5 PREDICTED: Glycine max methyl-CpG-binding domain-containing protein 13-like (LOC100807457), transcript variant X1, mRNA methyl-CpG-binding domain-containing protein 13-like(LOC100807457) coding protein psRNATarget
XM_006584644.2
ncRNA:24   AUACAAUUGUAGCUAAGAGGUUUU   1
  |=***||||||*|||||||||||*
targets:991   UGCAGUAACAUGGAUUCUCCAAAC   1014

2.5 PREDICTED: Glycine max methyl-CpG-binding domain-containing protein 13-like (LOC100807457), transcript variant X1, mRNA methyl-CpG-binding domain-containing protein 13-like(LOC100807457) coding protein psRNATarget