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BaseInfo

ncRNA ID novel_gma_miR8414
Species Glycine max
Class miRNA
Genome position Chr20:22950358-22950455 [-]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 22
Mature sequence(if miRNA) 1 - UUGAGAAUUAAAAUGUAAACUU - 22
Stem-loop(if miRNA) --      U                   AC         AU       A
  GUUUAC UUUUAAUUCUCAAAAGGUU  UGCCGUUAA  UUUUUUA C
  |||||| |||||||||||||||||||  |||||||||  |||||||
  CAAAUG AAAAUUAAGAGUUUUCCAG  ACGGCAAUU  AAGAAAU U
UU      U                   GA         AU       U
Stem-loop sequence GUUUACUUUUUAAUUCUCAAAAGGUUACUGCCGUUAAAUUUUUUUAACUUUAAAGAAUAUUAACGGCAAGGACCUUUUGAGAAUUAAAAUGUAAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577048.2
ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1
  *|||||||||||||||||||**
targets:1935   UAGUUUACAUUUUAAUUCUCUU   1956

2.5 PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA uncharacterized LOC100819268(LOC100819268) coding protein psRNATarget
XM_014773932.1
ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1
  *|||||||||||||||||||**
targets:2045   UAGUUUACAUUUUAAUUCUCUU   2066

2.5 PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA uncharacterized LOC100819268(LOC100819268) coding protein psRNATarget
XM_014775780.1
ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1
  |**||||=|||||*||||||||
targets:2385   AUUUUUAUAUUUUUAUUCUCAA   2406

2.5 PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 27-like (LOC100813815), transcript variant X3, mRNA ubiquitin carboxyl-terminal hydrolase 27-like(LOC100813815) coding protein psRNATarget
XM_014775779.1
ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1
  |**||||=|||||*||||||||
targets:2456   AUUUUUAUAUUUUUAUUCUCAA   2477

2.5 PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 27-like (LOC100813815), transcript variant X2, mRNA ubiquitin carboxyl-terminal hydrolase 27-like(LOC100813815) coding protein psRNATarget
XM_003524240.3
ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1
  |**||||=|||||*||||||||
targets:2513   AUUUUUAUAUUUUUAUUCUCAA   2534

2.5 PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 27-like (LOC100813815), transcript variant X1, mRNA ubiquitin carboxyl-terminal hydrolase 27-like(LOC100813815) coding protein psRNATarget