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BaseInfo

ncRNA ID novel_gma_miR8412
Species Glycine max
Class miRNA
Genome position Chr12:25690784-25690843 [+]
Reference genome Glycine_max_v2.0
Source SRR1294476
Length 24
Mature sequence(if miRNA) 1 - AGAGAUGGUGGCUGCUGUAGAGGU - 24
Stem-loop(if miRNA) --  -  A   UG    -       G  GGU
  AG AG UGG  GCUG CUGUAGA GU   G
  || || |||  |||| ||||||| ||   G
  UC UC GUC  CGAC GGCGUCU CG   U
GA  G  -   GU    C       G  UGG
Stem-loop sequence AGAGAUGGUGGCUGCUGUAGAGGUGGUGGUGGUGCGUCUGCGGCCAGCUGCUGCUGCUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767538.1
ncRNA:24   UGGAGAUGUCGUCGGUGGUAGAGA   1
  ||||||||=|||||||||||||||
targets:1451   ACCUCUACGGCAGCCACCAUCUCU   1474

1.0 PREDICTED: Glycine max uncharacterized LOC106796071 (LOC106796071), mRNA uncharacterized LOC106796071(LOC106796071) coding protein psRNATarget
XM_006591317.2
ncRNA:24   UGGAGAUGUCGUCGGUGGUAGAGA   1
  |=|||*|*||*|||||||||||||
targets:787   AUCUCAAGAGGAGCCACCAUCUCU   810

3.0 PREDICTED: Glycine max uncharacterized acetyltransferase At3g50280-like (LOC100799704), mRNA uncharacterized acetyltransferase At3g50280-like(LOC100799704) coding protein psRNATarget