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BaseInfo

ncRNA ID novel_gma_miR8410
Species Glycine max
Class miRNA
Genome position Chr20:40911416-40911486 [-]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 21
Mature sequence(if miRNA) 1 - UUUCUUAUAAAUAGGACCAGA - 21
Stem-loop(if miRNA) --  U                C  A    A     
  UG UCCUAUUUAUAAGAAA AA UUGU GUGUAA
  || |||||||||||||||| || |||| |||||A
  AC AGGAUAAAUAUUCUUU UU AACA UAUAUA
AG  C                U  A    A     
Stem-loop sequence UGUUCCUAUUUAUAAGAAACAAAUUGUAGUGUAAAAUAUAUAACAAAUUUUUUCUUAUAAAUAGGACCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003541465.3
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||||||||||||||
targets:1568   UCUGGUCCUAUUUAUAAGAAA   1588

0.0 PREDICTED: Glycine max peroxidase 19 (LOC100777463), mRNA peroxidase 19(LOC100777463) coding protein psRNATarget
XM_014764194.1
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||*|||||||||||
targets:683   UCUGGUCCUUUUUAUAAGAAA   703

1.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X9, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591237.2
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||*|||||||||||
targets:695   UCUGGUCCUUUUUAUAAGAAA   715

1.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X8, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591232.2
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||*|||||||||||
targets:720   UCUGGUCCUUUUUAUAAGAAA   740

1.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X3, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591234.2
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||*|||||||||||
targets:882   UCUGGUCCUUUUUAUAAGAAA   902

1.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X4, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591233.2
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||*|||||||||||
targets:887   UCUGGUCCUUUUUAUAAGAAA   907

1.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X2, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_014764193.1
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||*|||||||||||
targets:932   UCUGGUCCUUUUUAUAAGAAA   952

1.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X7, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591236.2
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||*|||||||||||
targets:943   UCUGGUCCUUUUUAUAAGAAA   963

1.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X5, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_003538317.3
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||*|||||||||||
targets:964   UCUGGUCCUUUUUAUAAGAAA   984

1.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X1, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591235.2
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |||||||||*|||||||||||
targets:976   UCUGGUCCUUUUUAUAAGAAA   996

1.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X6, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_003553882.3
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |=||||=||*|||||||||||
targets:1055   UUUGGUUCUUUUUAUAAGAAA   1075

2.5 PREDICTED: Glycine max peroxidase 55 (LOC100791275), mRNA peroxidase 55(LOC100791275) coding protein psRNATarget
XM_006574496.2
ncRNA:21   AGACCAGGAUAAAUAUUCUUU   1
  |=||*||||||||||||||=|
targets:3314   UUUGUUCCUAUUUAUAAGAGA   3334

2.5 PREDICTED: Glycine max alpha-amylase 3, chloroplastic-like (LOC100810333), mRNA alpha-amylase 3, chloroplastic-like(LOC100810333) coding protein psRNATarget