ncRNA ID | novel_gma_miR8402 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:45827980-45828169 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 19 |
Mature sequence(if miRNA) | 1 - UUUUGUUUCUGAAAUGGUU - 19 |
Stem-loop(if miRNA) |
--    G    UG    G  --    -------      -  U        --     ---      --U      -    GAU --    UGUUUUUGAAGUUAU   UUUU UUUC  AAAU GU  UACA       UAGGCA AA UUUGGUGU  UAAAU   GUCACG   GUAUUG GGUA   G  AGUA               U   |||| ||||  |||| ||  ||||       |||||| || ||||||||  |||||   ||||||   |||||| ||||   |  ||||   AGAG AAGG  UUUG CA  AUGU       AUCUGU UU AAAUCACG  GUUUA   UAGUGU   CAUAAU CCAU   C  UUAA               C GG    G    GU    A  UU    ACUAUCU      A  U        UG     UUU      UUC      U    --U UU    CUCUUUGUUGGUUGU |
Stem-loop sequence | UUUUGUUUCUGAAAUGGUUACAUAGGCAAAUUUUGGUGUUAAAUGUCACGUGUAUUGGGUAGAUGAGUAUGUUUUUGAAGUUAUUCUGUUGGUUGUUUCUCAAUUUUCUUACCUUAAUACCUUUGUGAUUUUAUUUGGUGCACUAAAUUUAUGUCUAUCUAUCAUGUAUUACAGUUUUGGGAAGGAGAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014778057.1 |
|
3.0 | PREDICTED: Glycine max putative Myb family transcription factor At1g14600 (LOC100810994), mRNA | putative Myb family transcription factor At1g14600(LOC100810994) | coding protein | psRNATarget |