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BaseInfo

ncRNA ID novel_gma_miR8402
Species Glycine max
Class miRNA
Genome position Chr19:45827980-45828169 [+]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 19
Mature sequence(if miRNA) 1 - UUUUGUUUCUGAAAUGGUU - 19
Stem-loop(if miRNA) --    G    UG    G  --    -------      -  U        --     ---      --U      -    GAU --    UGUUUUUGAAGUUAU
  UUUU UUUC  AAAU GU  UACA       UAGGCA AA UUUGGUGU  UAAAU   GUCACG   GUAUUG GGUA   G  AGUA               U
  |||| ||||  |||| ||  ||||       |||||| || ||||||||  |||||   ||||||   |||||| ||||   |  ||||
  AGAG AAGG  UUUG CA  AUGU       AUCUGU UU AAAUCACG  GUUUA   UAGUGU   CAUAAU CCAU   C  UUAA               C
GG    G    GU    A  UU    ACUAUCU      A  U        UG     UUU      UUC      U    --U UU    CUCUUUGUUGGUUGU
Stem-loop sequence UUUUGUUUCUGAAAUGGUUACAUAGGCAAAUUUUGGUGUUAAAUGUCACGUGUAUUGGGUAGAUGAGUAUGUUUUUGAAGUUAUUCUGUUGGUUGUUUCUCAAUUUUCUUACCUUAAUACCUUUGUGAUUUUAUUUGGUGCACUAAAUUUAUGUCUAUCUAUCAUGUAUUACAGUUUUGGGAAGGAGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778057.1
ncRNA:19   UUGGUAAAGUCUUUGUUUU   1
  **=||||||||||||||||
targets:223   UUUCAUUUCAGAAACAAAA   241

3.0 PREDICTED: Glycine max putative Myb family transcription factor At1g14600 (LOC100810994), mRNA putative Myb family transcription factor At1g14600(LOC100810994) coding protein psRNATarget