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BaseInfo

ncRNA ID novel_gma_miR8398
Species Glycine max
Class miRNA
Genome position Chr10:32106677-32106759 [+]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 24
Mature sequence(if miRNA) 1 - GUUAAUUUUUAAGACUUAUGGAUC - 24
Stem-loop(if miRNA) --   A         A            G            
  GUU AUUUUUAAG CUUAUGGAUCAA UUGAUCCGUAAGU
  ||| ||||||||| |||||||||||| ||||||||||||U
  CAA UAAAAAUUC GAAUGCUUAGUU AACUAGGCAUUUU
UU   C         C            A            
Stem-loop sequence GUUAAUUUUUAAGACUUAUGGAUCAAGUUGAUCCGUAAGUUUUUUACGGAUCAAAUUGAUUCGUAAGCCUUAAAAAUCAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:24   CUAGGUAUUCAGAAUUUUUAAUUG   1
  |||||=||||||||||||||*|||
targets:470   GAUCCGUAAGUCUUAAAAAUCAAC   493

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:24   CUAGGUAUUCAGAAUUUUUAAUUG   1
  |||||=||||||||||||||*|||
targets:1065   GAUCCGUAAGUCUUAAAAAUCAAC   1088

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget