Search result

BaseInfo

ncRNA ID	novel_gma_miR8396
Species	Glycine max
Class	miRNA
Genome position	Chr18:35222383-35222436 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451618
Length	22
Mature sequence(if miRNA)	1 - CGACUCGUAGACUCGUAAGAGU - 22
Stem-loop(if miRNA)	-  GUGAGAGCUCUACGAGUCGACUC  UC                       G  ||                       U  GA                       A U  GAAUGCUCAGAUGCUCAGCUCAA
Stem-loop sequence	UCGUGAGAGCUCUACGAGUCGACUCGUAAACUCGACUCGUAGACUCGUAAGAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014769315.1	ncRNA:22   UGAGAAUGCUCAGAUGCUCAGC   1   |=||||||||||||||||||=| targets:438   AUUCUUACGAGUCUACGAGUUG   459 Target Full Sequence	1.5	PREDICTED: Glycine max tRNA 2'-phosphotransferase 1-like (LOC100795797), transcript variant X2, mRNA	tRNA 2'-phosphotransferase 1-like(LOC100795797)	coding protein	psRNATarget
XM_006600130.2	ncRNA:22   UGAGAAUGCUCAGAUGCUCAGC   1   |=||||||||||||||||||=| targets:426   AUUCUUACGAGUCUACGAGUUG   447 Target Full Sequence	1.5	PREDICTED: Glycine max tRNA 2'-phosphotransferase 1-like (LOC100795797), transcript variant X4, mRNA	tRNA 2'-phosphotransferase 1-like(LOC100795797)	coding protein	psRNATarget
XM_014769314.1	ncRNA:22   UGAGAAUGCUCAGAUGCUCAGC   1   |=||||||||||||||||||=| targets:434   AUUCUUACGAGUCUACGAGUUG   455 Target Full Sequence	1.5	PREDICTED: Glycine max tRNA 2'-phosphotransferase 1-like (LOC100795797), transcript variant X1, mRNA	tRNA 2'-phosphotransferase 1-like(LOC100795797)	coding protein	psRNATarget