Search result

BaseInfo

ncRNA ID	novel_gma_miR8395
Species	Glycine max
Class	miRNA
Genome position	Chr18:53194323-53194379 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451618
Length	21
Mature sequence(if miRNA)	37 - UGGAUUUGUAAAUGGUCAUCU - 57
Stem-loop(if miRNA)	--U     UG AAA          AGGC    GGAUU  U   UGGUCAUCUA    C    |||||  |   ||||||||||    U    UUUAA  A   GUCAGUAGAU    A UAU     GU CGG          AAAU
Stem-loop sequence	UGGAUUUGUAAAUGGUCAUCUAAGGCCUAUAAAUAGAUGACUGGGCAUGAAUUUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006580073.2	ncRNA:21   UCUACUGGUAAAUGUUUAGGU   1   =||||=||||||*|||||||| targets:282   GGAUGGCCAUUUCCAAAUCCA   302 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102665569 (LOC102665569), transcript variant X2, mRNA	uncharacterized LOC102665569(LOC102665569)	coding protein	psRNATarget
XM_006580072.2	ncRNA:21   UCUACUGGUAAAUGUUUAGGU   1   =||||=||||||*|||||||| targets:282   GGAUGGCCAUUUCCAAAUCCA   302 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102665569 (LOC102665569), transcript variant X1, mRNA	uncharacterized LOC102665569(LOC102665569)	coding protein	psRNATarget
XM_006585078.2	ncRNA:21   UCUACUGGUAAAUGUUUAGGU   1   =||||=||||||*|||||||| targets:351   GGAUGGCCAUUUCCAAAUCCA   371 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100820280 (LOC100820280), transcript variant X2, mRNA	uncharacterized LOC100820280(LOC100820280)	coding protein	psRNATarget
XM_006585077.2	ncRNA:21   UCUACUGGUAAAUGUUUAGGU   1   =||||=||||||*|||||||| targets:348   GGAUGGCCAUUUCCAAAUCCA   368 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100820280 (LOC100820280), transcript variant X1, mRNA	uncharacterized LOC100820280(LOC100820280)	coding protein	psRNATarget