ncRNA ID | novel_gma_miR8390 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:36579373-36579455 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 24 |
Mature sequence(if miRNA) | 60 - CGGAUCAAGUUAAUCUGUAUGUCU - 83 |
Stem-loop(if miRNA) |
--          A       A  -    A      A    UA   ACAUACAGAU AACUUGA CC UAAA GACUUA GGAU  A   |||||||||| ||||||| || |||| |||||| ||||   UGUAUGUCUA UUGAACU GG AUUU UUGAAU UCUA  G UC          A       A  C    G      G    UU |
Stem-loop sequence | ACAUACAGAUAAACUUGAACCUAAAAGACUUAAGGAUUAAGUUAUCUGUAAGUUGUUUACGGAUCAAGUUAAUCUGUAUGUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006600975.2 |
|
0.0 | PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA | basic leucine zipper 9-like(LOC100776831) | coding protein | psRNATarget | |||||||||
XM_006600975.2 |
|
2.5 | PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA | basic leucine zipper 9-like(LOC100776831) | coding protein | psRNATarget |