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BaseInfo

ncRNA ID novel_gma_miR8390
Species Glycine max
Class miRNA
Genome position Chr18:36579373-36579455 [+]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 24
Mature sequence(if miRNA) 60 - CGGAUCAAGUUAAUCUGUAUGUCU - 83
Stem-loop(if miRNA) --          A       A  -    A      A    UA
  ACAUACAGAU AACUUGA CC UAAA GACUUA GGAU  A
  |||||||||| ||||||| || |||| |||||| ||||
  UGUAUGUCUA UUGAACU GG AUUU UUGAAU UCUA  G
UC          A       A  C    G      G    UU
Stem-loop sequence ACAUACAGAUAAACUUGAACCUAAAAGACUUAAGGAUUAAGUUAUCUGUAAGUUGUUUACGGAUCAAGUUAAUCUGUAUGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600975.2
ncRNA:24   UCUGUAUGUCUAAUUGAACUAGGC   1
  ||-|||||||||||||||||||||
targets:1220   AG-CAUACAGAUUAACUUGAUCCG   1242

0.0 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget
XM_006600975.2
ncRNA:24   UCUGUAUGUCUAAUUGAACUAGGC   1
  ||*|*|||=|||*|||||||||||
targets:1247   AGCCUUACGGAUCAACUUGAUCCG   1270

2.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget