ncRNA ID | novel_gma_miR8383 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:31904515-31904621 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCCGGAAGAAGAAUUUGUGACU - 22 |
Stem-loop(if miRNA) |
-UCA    -UUA              UAU             C          A     GCAA    UUCUUUCGGAAGAA   UUUUUUUGAAAAA UUUUUGGAAA U     ||||    ||||||||||||||   ||||||||||||| |||||||||| C     UGUU    AAGAAGGCCUUCUU   AAGAAGGCUUUUU AAAGGCCUUU U UCAG    UAAG              -CC             -          C |
Stem-loop sequence | UCAGCAAUUAUUCUUUCGGAAGAAUAUUUUUUUUGAAAAACUUUUUGGAAAAUCUCUUUCCGGAAAUUUUUCGGAAGAACCUUCUUCCGGAAGAAGAAUUUGUGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT098485.1 |
|
1.5 | Soybean clone JCVI-FLGm-12D21 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_006573284.2 |
|
2.0 | PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA | aquaporin PIP1-2-like(LOC100781984) | coding protein | psRNATarget | |||||||||
XM_006602964.2 |
|
3.0 | PREDICTED: Glycine max disease resistance protein RPP13-like (LOC100780593), mRNA | disease resistance protein RPP13-like(LOC100780593) | coding protein | psRNATarget |