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BaseInfo

ncRNA ID novel_gma_miR8381
Species Glycine max
Class miRNA
Genome position Chr17:37279600-37279667 [-]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 21
Mature sequence(if miRNA) 48 - UUUAUACGGAUGAACUACAUC - 68
Stem-loop(if miRNA) --            A               ACAA
  UUUAUACGGAUG ACUACAUCCGUAGGU    A
  |||||||||||| |||||||||||||||
  AAAUAUGCCUAU UGAUGUAGGUAUUCA    U
CU            A               AAGU
Stem-loop sequence UUUAUACGGAUGAACUACAUCCGUAGGUACAAAUUGAAACUUAUGGAUGUAGUAUAUCCGUAUAAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776929.1
ncRNA:21   CUACAUCAAGUAGGCAUAUUU   1
  *=|*|||||||||=|||||||
targets:1531   AGUAUAGUUCAUCUGUAUAAA   1551

2.5 PREDICTED: Glycine max DNA-directed RNA polymerase IV subunit 1-like (LOC100810483), transcript variant X2, mRNA DNA-directed RNA polymerase IV subunit 1-like(LOC100810483) coding protein psRNATarget
XM_006573692.2
ncRNA:21   CUACAUCAAGUAGGCAUAUUU   1
  *=|*|||||||||=|||||||
targets:1531   AGUAUAGUUCAUCUGUAUAAA   1551

2.5 PREDICTED: Glycine max DNA-directed RNA polymerase IV subunit 1-like (LOC100810483), transcript variant X1, mRNA DNA-directed RNA polymerase IV subunit 1-like(LOC100810483) coding protein psRNATarget