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BaseInfo

ncRNA ID	novel_gma_miR8380
Species	Glycine max
Class	miRNA
Genome position	Chr17:36420035-36420095 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451618
Length	24
Mature sequence(if miRNA)	38 - AAAACUGUAGAAAAUAAUAUUCCU - 61
Stem-loop(if miRNA)	--                 UAA   UG   A   GAAUAUUAUUUUCUACA   UUU  AUU C   |||||||||||||||||   |||  |||   CUUAUAAUAAAAGAUGU   AAA  UGA A UC                 -CA   GU   U
Stem-loop sequence	GAAUAUUAUUUUCUACAUAAUUUUGAUUACAUAGUUGAAAACUGUAGAAAAUAAUAUUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014775116.1	ncRNA:24   UCCU----UAUAAUAAAAGAUGUCAAAA   1   ||||----||||*|*||||||||||||| targets:469   AGGAGAAAAUAUGAGUUUCUACAGUUUU   496 Target Full Sequence	2.0	PREDICTED: Glycine max probable ADP-ribosylation factor GTPase-activating protein AGD11 (LOC100804342), mRNA	probable ADP-ribosylation factor GTPase-activating protein AGD11(LOC100804342)	coding protein	psRNATarget
XM_014763680.1	ncRNA:24   UCCU----UAUAAUAAAAGAUGUCAAAA   1   ||||----||||*|*||||||||||||| targets:721   AGGAGAAAAUAUGAGUUUCUACAGUUUU   748 Target Full Sequence	2.0	PREDICTED: Glycine max probable ADP-ribosylation factor GTPase-activating protein AGD11 (LOC100799376), transcript variant X1, mRNA	probable ADP-ribosylation factor GTPase-activating protein AGD11(LOC100799376)	coding protein	psRNATarget
XM_003539196.3	ncRNA:24   UCCU----UAUAAUAAAAGAUGUCAAAA   1   ||||----||||*|*||||||||||||| targets:830   AGGAGAAAAUAUGAGUUUCUACAGUUUU   857 Target Full Sequence	2.0	PREDICTED: Glycine max probable ADP-ribosylation factor GTPase-activating protein AGD11 (LOC100799376), transcript variant X2, mRNA	probable ADP-ribosylation factor GTPase-activating protein AGD11(LOC100799376)	coding protein	psRNATarget
XM_003522768.3	ncRNA:24   UCCUUAUAAUAAAAGAUGUCAAAA   1   ***|||||||*||||||||*|||| targets:21   UACAAUAUUACUUUCUACAUUUUU   44 Target Full Sequence	2.5	PREDICTED: Glycine max tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like (LOC100783494), transcript variant X2, mRNA	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like(LOC100783494)	coding protein	psRNATarget
XM_014774393.1	ncRNA:24   UCCUUAUAAUAAAAGAUGUCAAAA   1   ***|||||||*||||||||*|||| targets:30   UACAAUAUUACUUUCUACAUUUUU   53 Target Full Sequence	2.5	PREDICTED: Glycine max tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like (LOC100783494), transcript variant X1, mRNA	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like(LOC100783494)	coding protein	psRNATarget