ncRNA ID | novel_gma_miR8373 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:5884672-5884844 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 24 |
Mature sequence(if miRNA) | 150 - ACACGUGACCGUCUUAGAAUGAAU - 173 |
Stem-loop(if miRNA) |
--                         GA    C    U    -    G         A GA  AUCCU       A             UCAUUCUAAGAUGGUCACGUGUGAA  ACCG CUUA AAUG GUAU CAUUCUACG U  UU     AAAACCG UGUAGAAUGUA   |||||||||||||||||||||||||  |||| |||| |||| |||| ||||||||| |  ||     ||||||| ||||||||||U   AGUAAGAUUCUGCCAGUGCACACUU  UGGC GAAU UUAC CAUA GUAAGAUGU G  AA     UUUUGGC GCAUCUUAUAU UA                         UC    A    C    U    -         A UC  GAACC       A           |
Stem-loop sequence | UCAUUCUAAGAUGGUCACGUGUGAAGAACCGCCUUAUAAUGGUAUGCAUUCUACGAUGAUUAUCCUAAAACCGAUGUAGAAUGUAUUAUAUUCUACGACGGUUUUCCAAGAACUGAUGUAGAAUGAUACUCAUUCUAAGACGGUCUUUCACACGUGACCGUCUUAGAAUGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014762037.1 |
|
0.0 | PREDICTED: Glycine max putative DUF21 domain-containing protein At1g03270 (LOC102659380), mRNA | putative DUF21 domain-containing protein At1g03270(LOC102659380) | coding protein | psRNATarget |