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BaseInfo

ncRNA ID novel_gma_miR8371
Species Glycine max
Class miRNA
Genome position Chr10:17411086-17411167 [-]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 20
Mature sequence(if miRNA) 1 - UUUAGAACCGAUGUAGAAUA - 20
Stem-loop(if miRNA) --                          UG        UGU
  UUUUACAUCGGUUCUGAAGGUACAAA  AUGUAGAA   C
  ||||||||||||||||||||||||||  ||||||||
  AAGAUGUAGCCAAGAUUUCUAUGUUU  UACAUCUU   A
AU                          GU        UCA
Stem-loop sequence UUUUACAUCGGUUCUGAAGGUACAAAUGAUGUAGAAUGUCAACUUUCUACAUUGUUUGUAUCUUUAGAACCGAUGUAGAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539359.3
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  **|||||||||||||||||*
targets:2688   CCUUCUACAUCGGUUCUAAU   2707

2.0 PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA MLO-like protein 6(LOC100776714) coding protein psRNATarget
XM_006588741.2
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  ||||||||||||*||||||*
targets:2876   UAUUCUACAUCGAUUCUAAC   2895

2.5 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA phosphoinositide phosphatase SAC1-like(LOC102670366) coding protein psRNATarget
XM_014763017.1
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  ||||||||||||*||||||*
targets:2972   UAUUCUACAUCGAUUCUAAC   2991

2.5 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA phosphoinositide phosphatase SAC1-like(LOC102660101) coding protein psRNATarget
XM_006598094.2
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  *|||||||||||||||||*=
targets:850   CAUUCUACAUCGGUUCUAUG   869

2.5 PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA nuclear pore complex protein GP210-like(LOC100812621) coding protein psRNATarget
XM_014768221.1
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  *|||||||||||||||||*=
targets:963   CAUUCUACAUCGGUUCUAUG   982

2.5 PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA nuclear pore complex protein GP210-like(LOC100812621) coding protein psRNATarget
XM_014768217.1
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  *|||||||||||||||||*=
targets:1123   CAUUCUACAUCGGUUCUAUG   1142

2.5 PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA nuclear pore complex protein GP210-like(LOC100812621) coding protein psRNATarget
XM_014768216.1
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  *|||||||||||||||||*=
targets:1400   CAUUCUACAUCGGUUCUAUG   1419

2.5 PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA nuclear pore complex protein GP210-like(LOC100812621) coding protein psRNATarget
XM_014768212.1
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  *|||||||||||||||||*=
targets:1563   CAUUCUACAUCGGUUCUAUG   1582

2.5 PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA nuclear pore complex protein GP210-like(LOC100812621) coding protein psRNATarget
XM_014766969.1
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  *|||||=||||*||||||||
targets:924   AAUUCUGCAUCAGUUCUAAA   943

2.5 PREDICTED: Glycine max random slug protein 5 (LOC100800854), transcript variant X3, mRNA random slug protein 5(LOC100800854) coding protein psRNATarget
XM_014766968.1
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  *|||||=||||*||||||||
targets:1007   AAUUCUGCAUCAGUUCUAAA   1026

2.5 PREDICTED: Glycine max random slug protein 5 (LOC100800854), transcript variant X2, mRNA random slug protein 5(LOC100800854) coding protein psRNATarget
AK244137.1
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  *|||||=||||*||||||||
targets:1025   AAUUCUGCAUCAGUUCUAAA   1044

2.5 Glycine max cDNA, clone: GMFL01-02-D03 NA coding protein psRNATarget
XM_003544367.3
ncRNA:20   AUAAGAUGUAGCCAAGAUUU   1
  *|||||=||||*||||||||
targets:1083   AAUUCUGCAUCAGUUCUAAA   1102

2.5 PREDICTED: Glycine max random slug protein 5 (LOC100800854), transcript variant X1, mRNA random slug protein 5(LOC100800854) coding protein psRNATarget