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BaseInfo

ncRNA ID	novel_gma_miR8365
Species	Glycine max
Class	miRNA
Genome position	Chr9:40981412-40981608 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294476
Length	20
Mature sequence(if miRNA)	1 - AUUGGAUUGAAGGGAGCUCC - 20
Stem-loop(if miRNA)	--                  AA  -            -   CAA  ---   G    CU       U      CC         UGUGA      AAA      G   AGCUCCUUUCAAUCCAAU  GG AGGGCUGAGGAG UGG   GA   GCU UCAU  CAUGCAU UGGCUA  CUUAAUGUU     UCAGAA   GAUCUU C   ||||||||||||||||||  || |||||||||||| |||   ||   ||| ||||  ||||||| ||||||  |||||||||     ||||||   |||||| A   UCGAGGGAAGUUAGGUUA  CC UCCCGAUUCUUC GCC   CU   CGA AGUG  GUACGUG ACCGGU  GAAUUGUAA     AGUUUU   UUAGGG U CC                  --  A            C   CAC  CAA   G    UG       U      UU         -----      --A      U
Stem-loop sequence	AGCUCCUUUCAAUCCAAUAAGGAGGGCUGAGGAGUGGCAAGAGCUGUCAUCUCAUGCAUUUGGCUACCCUUAAUGUUUGUGAUCAGAAAAAGAUCUUGCAUUGGGAUUAUUUUGAAAUGUUAAGUUUGGCCAUGUGCAUGGUGUGAGAGCAACUCCACCCGCCUUCUUAGCCCUACCAUUGGAUUGAAGGGAGCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003543777.3	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1083   GGAGCUCCCUUCACUCCAAU   1102 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100800658), transcript variant X1, mRNA	transcription factor GAMYB-like(LOC100800658)	coding protein	psRNATarget
XM_006593564.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1098   GGAGCUCCCUUCACUCCAAU   1117 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100800658), transcript variant X4, mRNA	transcription factor GAMYB-like(LOC100800658)	coding protein	psRNATarget
XM_014765331.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1138   GGAGCUCCCUUCACUCCAAU   1157 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100800658), transcript variant X3, mRNA	transcription factor GAMYB-like(LOC100800658)	coding protein	psRNATarget
XM_006593563.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1406   GGAGCUCCCUUCACUCCAAU   1425 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100800658), transcript variant X2, mRNA	transcription factor GAMYB-like(LOC100800658)	coding protein	psRNATarget
XM_006605565.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1515   GGAGCUCCCUUCACUCCAAU   1534 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100818609), transcript variant X2, mRNA	transcription factor GAMYB-like(LOC100818609)	coding protein	psRNATarget
XM_014773037.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1613   GGAGCUCCCUUCACUCCAAU   1632 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100818609), transcript variant X1, mRNA	transcription factor GAMYB-like(LOC100818609)	coding protein	psRNATarget
XM_014767378.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1305   GGAGCUCCCUUCACUCCAAU   1324 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100785877), transcript variant X2, mRNA	transcription factor GAMYB-like(LOC100785877)	coding protein	psRNATarget
XM_006597995.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1311   GGAGCUCCCUUCACUCCAAU   1330 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100785877), transcript variant X1, mRNA	transcription factor GAMYB-like(LOC100785877)	coding protein	psRNATarget
EU328398.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1366   GGAGCUCCCUUCACUCCAAU   1385 Target Full Sequence	1.5	Glycine max GAMYB protein (GAMYB) mRNA, complete cds	NA	coding protein	psRNATarget
XM_006594289.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1364   GGAGCUCCCUUCACUCCAAU   1383 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100810415), transcript variant X4, mRNA	transcription factor GAMYB-like(LOC100810415)	coding protein	psRNATarget
XM_006594286.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1370   GGAGCUCCCUUCACUCCAAU   1389 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100810415), transcript variant X1, mRNA	transcription factor GAMYB-like(LOC100810415)	coding protein	psRNATarget
NM_001317612.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1402   GGAGCUCCCUUCACUCCAAU   1421 Target Full Sequence	1.5	Glycine max transcription factor GAMYB-like (LOC100810415), mRNA	transcription factor GAMYB-like(LOC100810415)	coding protein	psRNATarget
KC525897.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1402   GGAGCUCCCUUCACUCCAAU   1421 Target Full Sequence	1.5	Glycine max GAMBY1-like family protein (GAMYB1) mRNA, complete cds	NA	coding protein	psRNATarget
XM_006594287.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1424   GGAGCUCCCUUCACUCCAAU   1443 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100810415), transcript variant X2, mRNA	transcription factor GAMYB-like(LOC100810415)	coding protein	psRNATarget
XM_006594288.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1823   GGAGCUCCCUUCACUCCAAU   1842 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100810415), transcript variant X3, mRNA	transcription factor GAMYB-like(LOC100810415)	coding protein	psRNATarget
XM_006597998.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||*|||||| targets:1952   GGAGCUCCCUUCACUCCAAU   1971 Target Full Sequence	1.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100785877), transcript variant X3, mRNA	transcription factor GAMYB-like(LOC100785877)	coding protein	psRNATarget
JB170935.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||=|||||* targets:14   GGAGCUCCCUUCAGUCCAAG   33 Target Full Sequence	2.5	Sequence 8599 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242604.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||=|||||* targets:14   GGAGCUCCCUUCAGUCCAAG   33 Target Full Sequence	2.5	Sequence 8599 from Patent EP2985353	NA	coding protein	psRNATarget
HI410474.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||=|||||* targets:14   GGAGCUCCCUUCAGUCCAAG   33 Target Full Sequence	2.5	Sequence 8599 from Patent EP2074227	NA	coding protein	psRNATarget
BT098668.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   |||||||||||||=|||||* targets:281   GGAGCUCCCUUCAGUCCAAG   300 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-12F22 unknown mRNA	NA	coding protein	psRNATarget
XM_003526306.3	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   *||||||||||||*|||||* targets:1262   AGAGCUCCCUUCACUCCAAA   1281 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100805804), transcript variant X2, mRNA	transcription factor GAMYB-like(LOC100805804)	coding protein	psRNATarget
XM_006582324.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   *||||||||||||*|||||* targets:1262   AGAGCUCCCUUCACUCCAAA   1281 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100805804), transcript variant X1, mRNA	transcription factor GAMYB-like(LOC100805804)	coding protein	psRNATarget
XM_003523865.3	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   *||||||||||||*|||||* targets:1325   AGAGCUCCCUUCACUCCAAA   1344 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100792349), transcript variant X2, mRNA	transcription factor GAMYB-like(LOC100792349)	coding protein	psRNATarget
XM_006578333.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   *||||||||||||*|||||* targets:1325   AGAGCUCCCUUCACUCCAAA   1344 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor GAMYB-like (LOC100792349), transcript variant X1, mRNA	transcription factor GAMYB-like(LOC100792349)	coding protein	psRNATarget
XM_014761970.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUA   1   *|*|||||||||||||||*| targets:6098   CGUGCUCCCUUCAAUCCAUU   6117 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102663500 (LOC102663500), mRNA	uncharacterized LOC102663500(LOC102663500)	coding protein	psRNATarget