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BaseInfo

ncRNA ID novel_gma_miR8359
Species Glycine max
Class miRNA
Genome position Chr10:25458957-25459082 [-]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 19
Mature sequence(if miRNA) 1 - AGAAUCGAUGUAGAAUGUU - 19
Stem-loop(if miRNA) --           A   AUGAGAG               A   CG              CUGC
  CAUUCUACAUC GUU       GACCAAUGUAGAAUG UAA  AUUCUAAGAUGGUC    A
  ||||||||||| |||       ||||||||||||||| |||  ||||||||||||||
  GUAAGAUGUAG UAA       CUGGUUACAUCUUAC AUU  UAAGAUUCUGCCAG    C
UU           C   GAGUAUA               G   AG              AAGC
Stem-loop sequence CAUUCUACAUCAGUUAUGAGAGGACCAAUGUAGAAUGAUAACGAUUCUAAGAUGGUCCUGCACCGAAGACCGUCUUAGAAUGAUUAGCAUUCUACAUUGGUCAUAUGAGAAUCGAUGUAGAAUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003528210.1
ncRNA:19   UUGUAAGAUGUAGCUAAGA   1
  ||||||||||||*|||||*
targets:51   AACAUUCUACAUGGAUUCG   69

2.5 PREDICTED: Glycine max probable calcium-binding protein CML15 (LOC100790108), mRNA probable calcium-binding protein CML15(LOC100790108) coding protein psRNATarget
XM_006588741.2
ncRNA:19   UUG-UAAGAUGUAGCUAAGA   1
  *||-||||||||||||||||
targets:2873   CACUAUUCUACAUCGAUUCU   2892

3.0 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA phosphoinositide phosphatase SAC1-like(LOC102670366) coding protein psRNATarget
XM_014763017.1
ncRNA:19   UUG-UAAGAUGUAGCUAAGA   1
  *||-||||||||||||||||
targets:2969   CACUAUUCUACAUCGAUUCU   2988

3.0 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA phosphoinositide phosphatase SAC1-like(LOC102660101) coding protein psRNATarget