ncRNA ID | novel_gma_miR8359 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:25458957-25459082 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 19 |
Mature sequence(if miRNA) | 1 - AGAAUCGAUGUAGAAUGUU - 19 |
Stem-loop(if miRNA) |
--           A   AUGAGAG               A   CG              CUGC   CAUUCUACAUC GUU       GACCAAUGUAGAAUG UAA  AUUCUAAGAUGGUC    A   ||||||||||| |||       ||||||||||||||| |||  ||||||||||||||   GUAAGAUGUAG UAA       CUGGUUACAUCUUAC AUU  UAAGAUUCUGCCAG    C UU           C   GAGUAUA               G   AG              AAGC |
Stem-loop sequence | CAUUCUACAUCAGUUAUGAGAGGACCAAUGUAGAAUGAUAACGAUUCUAAGAUGGUCCUGCACCGAAGACCGUCUUAGAAUGAUUAGCAUUCUACAUUGGUCAUAUGAGAAUCGAUGUAGAAUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003528210.1 |
|
2.5 | PREDICTED: Glycine max probable calcium-binding protein CML15 (LOC100790108), mRNA | probable calcium-binding protein CML15(LOC100790108) | coding protein | psRNATarget | |||||||||
XM_006588741.2 |
|
3.0 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA | phosphoinositide phosphatase SAC1-like(LOC102670366) | coding protein | psRNATarget | |||||||||
XM_014763017.1 |
|
3.0 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA | phosphoinositide phosphatase SAC1-like(LOC102660101) | coding protein | psRNATarget |